Real-time fluorescence PCR (polymerase chain reaction) kit and detection method for detecting Byssochlamys nivea
A real-time fluorescence, silkworm mold technology, applied in biochemical equipment and methods, fluorescence/phosphorescence, microbial determination/inspection, etc., can solve problems such as cumbersome operation, fat cracking, product quality problems, etc., to reduce false positives efficiency, avoid cross-contamination, improve specificity
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[0029] Example 1: Specific primers, fluorescent probes
[0030] 1. Material:
[0031] PCR reaction buffer (10×) (Mg 2+ free), MgCl 2 , DNTP mixture, DNA polymerase were purchased from Takara Company;
[0032] ROX dye was purchased from Shanghai Weidian Biotechnology Co., Ltd.
[0033] The ABI7300 real-time fluorescent PCR instrument is a product of Applied Biosystems, USA.
[0034] 2. Design and synthesis of primers and probes:
[0035] Using the Beta tubulin gene sequence of S. snow white as template, using PrimerExpress TM (V3.0, American ABI company) software analyzes primer and TaqMan probe sites, and selects the best combination from them:
[0036] Upstream primer: 5'-GGTTGTTGTTGACTTCCCTGATG-3'
[0037] Downstream primer: 5′-CCATGGTACCAGGCTCAAGGT-3′
[0038] Fluorescent probe: 5'-FAM-ACGCTCCATATGCTGACCCTCCTCCTAG-BHQ1-3'
[0039] Among them, FAM is a fluorescent reporter group, and BHQ1 is a fluorescent quenching group.
[0040] They are all synthesized by Shanghai Yingweijieji Biotechn...
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[0041] Example 2: Evaluation of the sensitivity and specificity of the real-time fluorescence PCR
[0042] 1. Strain detection:
[0043] Use 2 standard strains of Silkworm Snow White (ATCC22260, ATCC18742), and pure Silkworm (ATCC24474, ATCC24008), Paecilomyces variabilis (CICC4024, CICC4025), New Sartorius fischeri (ATCC66640, ATCC66641), Aspergillus fumigatus (ATCC10894, ATCC30367), Aspergillus niger (ATCC16404, ATCC10582), Saccharomyces cerevisiae (ATCC26603, ATCC26785), Staphylococcus aureus (ATCC6538), Shigella sonnei (ATCC25931), Escherichia coli (ATCC25922), Vibrio parahaemolyticus (isolated and preserved in our laboratory), Listeria monocytogenes (ATCC19114), Enterobacter sakazakii (ATCC51329), Shigella flexneri (ATCC12022), Streptococcus hemolyticus (CMCC32210), etc. Suspension of non-siliconia fungus, extract DNA, and then use upstream and downstream primers and probes for detection to perform PCR amplification on the ABI7300 real-time fluorescent PCR instrument from ABI...
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