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Chickpea ascochyta blight fungal molecule detection primer and applications thereof

The invention relates to a technology for molecular detection of Ascoliaceae, which is applied in the field of molecular detection primers for Chickpea Ascotolius blight, and can solve the problems of long cycle and low accuracy.

Inactive Publication Date: 2013-08-21
XINJIANG AGRI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] The purpose of the present invention is to provide a molecular detection primer for chickpea dispora leaf blight for the biological detection method of chickpea dispora leaf blight in the prior art, which requires a long cycle and low accuracy And its application, the specific primer: upstream primer 7-5f (25bp): 5'-CCCGCTACCTCTTACCCATGTCTTT-3'; downstream primer 7-5r (23bp): 5'-GTCGTTATGAGTGCAAAGCGCGA-3'

Method used

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  • Chickpea ascochyta blight fungal molecule detection primer and applications thereof
  • Chickpea ascochyta blight fungal molecule detection primer and applications thereof
  • Chickpea ascochyta blight fungal molecule detection primer and applications thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0137] Example 1: Primers for specific amplification of Ascochyta rabeie:

[0138] Specific Detection of Ascochyta rabeie, the Pathogen of Chickpea Dispora Leaf Blight

[0139] PCR amplification reaction system 25 μL, including 10 × buffer 2.5 μL, deoxynucleic acid triphosphate substrate (dNTPs) (2.5 mMeach) 2.5 μL, primer 7-5f / 7-5r (10 μM) each 0.5 μL, Taq DNA polymerase (Takara ) 0.5 μL, DNA template 2 μL, sterile deionized water to make up to 25 μL; PCR reaction conditions: pre-denaturation at 94 °C for 5 min, denaturation at 94 °C for 50 s, annealing at 57.5 °C for 50 s, extension at 72 °C for 2 min, a total of 30 cycles, and finally The temperature is 72°C for 10 minutes, and the temperature is 4°C for storage;

[0140] Test results:

[0141] Specificity of detection: In addition to the DNA of Ascochyta rabeie, the pathogenic bacterium Ascochyta rabeie from Mulei County, Xinjiang, my country, which can specifically amplify a 440bp product, other Rhizoctonia solani and A...

Embodiment 2

[0142] Embodiment 2: the sensitivity amplification of primers to the chickpea shell bisporus leaf blight pathogen Ascochyta rabeie:

[0143] Dilution of DNA concentration: the extracted genomic DNA of Ascochyta rabeie, the pathogenic bacteria of chickpea husk bisporus leaf blight, was diluted by 10 times after the concentration was measured by a spectrophotometer;

[0144] Sensitivity detection of Ascochyta rabeie, the pathogen of chickpea dispora leaf blight:

[0145] PCR amplification reaction system 25 μL, including 10 × buffer 2.5 μL, deoxynucleic acid triphosphate substrate (dNTPs) (2.5 mM each) 2.5 μL, primer 7-5f / 7-5r (10 μM) each 0.5 μL, Taq DNA polymerase ( Takara) 0.5 μL, DNA template 2 μL, and sterile deionized water to make up to 25 μL. PCR reaction conditions: pre-denaturation at 94°C for 5 min, denaturation at 94°C for 50 s, annealing at 57.5°C for 50 s, extension at 72°C for 2 min, 30 cycles in total, final temperature at 72°C for 10 min, storage at 4°C;

[01...

Embodiment 3

[0148] Embodiment 3: the specific detection of chickpea shell dispora leaf blight diseased body, soil with bacteria, and seeds with bacteria:

[0149] DNA extraction and detection:

[0150] The residue of chickpea husk dispora leaf blight, fungus-carrying soil, and fungus-carrying seeds were all extracted by CTAB method, and PCR amplification was carried out according to the above method. The PCR amplification reaction system was 25 μL, including 10×buffer2.5 μL, and Triphosphate substrate (dNTPs) (2.5mM each) 2.5μL, primer 7-5f / 7-5r (10μM) 0.5μL each, Taq DNA polymerase (Takara) 0.5μL, DNA template 2μL, sterile deionized water to make up to 25 μL; PCR reaction conditions: Pre-denaturation at 94°C for 5 min, denaturation at 94°C for 50 s, annealing at 57.5°C for 50 s, extension at 72°C for 2 min, 30 cycles in total, final temperature at 72°C for 10 min, storage at 4°C, electrophoresis detection of amplified products ;

[0151] Test results:

[0152] The test results showed ...

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Abstract

The invention relates to a chickpea ascochyta blight fungal molecule detection primer and applications thereof. The specific primer comprises an upstream primer 7-5f(25 bp): 5'-CCCGCTACCTCTTACCCATGTCTTT-3' and a downstream primer 7-5r(23 bp): 5'-GTCGTTATGAGTGCAAAGCGCGA-3'. Through PCR (polymerase chain reaction) amplification and agarose gel electrophoresis, a specific amplification product with a fragment length of 440 bp can be specifically amplified in the pathogenic bacteria pure DNA (deoxyribonucleic acid), pathogenetic tissues, soil and sick seeds of chickpea ascochyta blight so as to carry out rapid detection on the pathogenic bacteria of chickpea ascochyta blight. The specific molecule detection primer and application method thereof disclosed by the invention can be applied to the rapid, sensitive and specific detection of plant tissues, soil and seeds infected with chickpea ascochyta in production practices, and also can be applied to the early diagnosis of diseases in the fields and the monitoring and identification of bacteria so as to provide a reliable technical and theoretical basis for the prevention and control of diseases caused by chickpea ascochyta blight.

Description

technical field [0001] The invention belongs to the field of crop disease detection, identification and prevention technology, and more specifically relates to a molecular detection primer for Phytophthora bisporum and its application. Background technique [0002] Chickpea bisporus leaf blight caused by the pathogen Ascochyta rabiei is a devastating disease. The disease was first discovered in Mulei County, Xinjiang in 2007. reduction in area. At present, the disease has posed a threat to chickpea production in my country. The pathogen is mainly carried by soil and seeds, and overwinters as mycelium and conidia on fallen leaves, and produces new conidia in the early summer of the following year. The conidia are spread by wind and rain, and after reaching the leaf surface, they invade through the stomata, causing initial infection. After the pathogen invades the host, after a certain period of time, new conidia can be produced, causing re-infection. The plants grow dense...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12Q1/04C12N15/11C12R1/645
Inventor 羌松马丽娟马德英
Owner XINJIANG AGRI UNIV