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Triple real-time fluorescence PCR (Polymerase Chain Reaction) detection kit of vibrio parahaemolyticus

A technology of Vibrio hemolyticus and detection kit, which is applied in the biological field, can solve the problems of dye redistribution, limited application of real-time fluorescent PCR of dyes, low detection sensitivity, etc., and achieves the degree of sensitive automation, rapid real-time fluorescent PCR and detection cost. low effect

Active Publication Date: 2014-05-07
嘉兴市疾病预防控制中心
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Real-time fluorescent PCR is mainly divided into two types: probes and dyes. Probe-based real-time fluorescent PCR needs to synthesize fluorescently labeled probes. Due to the high synthesis cost of probes, the detection cost of probe-based real-time fluorescent PCR is high; Although the detection cost of dye-based real-time fluorescent PCR is low, due to the early use of unsaturated fluorescent dye SYBR Green I, there are problems such as poor stability and dye redistribution, low detection sensitivity and not suitable for multiple real-time fluorescent PCR, which limits the use of dyes. The application of real-time fluorescent PCR in the field of inspection and detection, with the emergence of saturated fluorescent dyes such as Eva Green and LC Green, the detection sensitivity of dye-based real-time fluorescent PCR has been significantly improved, and since the problem of dye redistribution is solved, it can be used in combination with melting curve technology Multiple real-time fluorescent PCR detection, so it has shown great advantages in the field of inspection and detection

Method used

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  • Triple real-time fluorescence PCR (Polymerase Chain Reaction) detection kit of vibrio parahaemolyticus
  • Triple real-time fluorescence PCR (Polymerase Chain Reaction) detection kit of vibrio parahaemolyticus
  • Triple real-time fluorescence PCR (Polymerase Chain Reaction) detection kit of vibrio parahaemolyticus

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0028] The kit of the present invention is composed of EvaGreen PCR premix, three pairs of specific primers, a positive control, and a negative control. The EvaGreen PCR premix includes PCR buffer, dNTP mixture, DNA polymerase and saturated fluorescent dye EvaGreen; the positive controls are tdh, trh Double positive Vibrio parahaemolyticus DNA extract; negative control is ultrapure water.

[0029] EvaGreen PCR master mix can be purchased as a commercial EvaGreen PCR master mix, or can be prepared by yourself.

[0030] Three pairs of specific primers are as follows:

[0031] tdh upstream primer: 5'-CTTCCATCTGTCCCTTTTTCCTGCC-3'

[0032] tdh downstream primer: 5'-CCTGACGTTGTGAATACTGATTGACCATA-3'

[0033] trh upstream primer: 5'-TACCTTTTCCTTCTCCAGGTTCGG-3'

[0034] trh downstream primer: 5'-TCGTTTTATGTTTCGGTTTGTCCAGT-3'

[0035] toxR upstream primer: 5'-TCTTCTGACGCAATCGTTGAACCA-3'

[0036] ToxR downstream primer: 5'-CTGATACTCACCAATCTGACGGAACTG-3'.

[0037] Utilize the detect...

Embodiment 2

[0039] Example 2 : specificity experiment

[0040] Candida albicans (ATCC 10231), Enterobacter sakazakii (ATCC 51329), Escherichia coli (ATCC 25922), Salmonella typhi (ATCC 50097), Staphylococcus aureus (ATCC 25923), Listeria monocytogenes (CMCC 54006), Shigella flexneri (ATCC 12022), Pseudomonas aeruginosa (ATCC 27853), Yersinia enterocolitica (ATCC 23715), Bacillus cereus (ATCC 11778), Mimic arc V. vulnificus (ATCC 33653), Vibrio vulnificus (ATCC 27562), Vibrio alginolyticus (ATCC 17749) and Vibrio cholerae as samples to be tested, standard strain of Vibrio parahaemolyticus (ATCC 33847) and tdh, trh double positive parahaemolyticus Vibrio strains were used as a positive control, and ultrapure water was used as a negative control. Candida albicans (ATCC 10231), Enterobacter sakazakii (ATCC 51329), Escherichia coli (ATCC 25922), Salmonella typhi (ATCC 50097), Staphylococcus aureus (ATCC 25923), Shigella flexneri (ATCC 12022), Pseudomonas aeruginosa (ATCC 27853), Yersinia e...

Embodiment 3

[0041] Example 3 : Sensitivity experiment

[0042] Using tdh, trh double-positive Vibrio parahaemolyticus strain DNA extract as a template, dilute to 50ng / μL, 5 ng / μL, 500pg / μL, 50 pg / μL, 5 pg / μL and 500 fg / μL with ultrapure water For a series of dilutions such as μL, 1 μL of template DNA was taken for each dilution and tested according to the method described in Example 1, and three replicate wells were made for each dilution. The results show that even if only 5pg of template DNA is contained in the amplification reaction system, an obvious amplification curve can be produced, and the concentration of template DNA has a good linear relationship with the Cq value. The higher the concentration, the lower the Cq value. For the test results, see figure 2 , image 3 .

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Abstract

The invention provides a triple real-time fluorescence PCR (Polymerase Chain Reaction) detection kit of vibrio parahaemolyticus. The triple real-time fluorescence PCR detection kit comprises three pairs of specific primers, EvaGreenPCR premixed liquid, negative control and positive control, wherein the specific primers comprise thermostable direct hemolysin gene (tdh), thermostable related hemolysin gene (trh) and toxin expression and regulation protein gene (toxR) of the vibrio parahaemolyticus. The triple real-time fluorescence PCR detection kit not only has the advantages of fast real-time fluorescence PCR, sensitivity and high degree of automation, but also carries out triple real-time fluorescence detection on the basis of a melting curve technology, does not need to synthesize an expensive detection probe, is low in detection cost, can finish detection of three target genes only by the most conventional FAM / SYBR channel, is low in requirement on a real-time fluorescence PCR instrument, is almost applicable to all the real-time fluorescence PCR instruments sold on market, and is short in detection period, low in detection cost and reliable in detection result.

Description

technical field [0001] The invention belongs to the field of biotechnology, and relates to a triple real-time fluorescent PCR detection kit and a detection method for vibrio parahaemolyticus. Background technique [0002] Vibrio parahaemolyticus (Vibrio parahaemolyticus) is a Gram-negative halophilic Vibrio isolated from a food poisoning patient in Japan by Fujino et al. in 1953. It is one of the more important pathogenic bacteria in the Vibrio genus. Eating food contaminated by this bacterium can cause food poisoning. Clinically, the main symptoms are acute onset, abdominal pain, vomiting, diarrhea and watery stool. Vibrio parahaemolyticus is a marine bacterium mainly derived from seafood such as fish, shrimp, crab, shellfish and seaweed. The bacterium has strong survival ability and is the most common pathogenic bacterium in bacterial food poisoning in coastal areas. The traditional detection methods of Vibrio parahaemolyticus include pre-enrichment, selective enrichment...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12Q1/04C12R1/63
CPCC12Q1/04C12Q1/686C12Q2537/143C12Q2561/113C12Q2563/107
Inventor 何培彦
Owner 嘉兴市疾病预防控制中心