Supercharge Your Innovation With Domain-Expert AI Agents!

Polypeptide specifically binding to trb3 protein, its screening method, identification and use

A specific, selected technology, applied in the field of medicine, can solve the problems of lack of ATP binding sites and catalytic residues, lack of kinase activity, etc.

Active Publication Date: 2020-07-14
INST OF MATERIA MEDICA CHINESE ACAD OF MEDICAL SCI
View PDF2 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

All three proteins contain Ser / Thr protein kinase-like domains (Kinase like domain, KD), but lack ATP binding sites and catalytic residues, so they have no kinase activity

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Polypeptide specifically binding to trb3 protein, its screening method, identification and use
  • Polypeptide specifically binding to trb3 protein, its screening method, identification and use
  • Polypeptide specifically binding to trb3 protein, its screening method, identification and use

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0033] Example 1 The surface plasmon resonance method is used to screen peptides that bind to TRB3 protein.

[0034]First, the P62 protein is truncated into different polypeptide fragments, and the peptides are synthesized with a peptide solid-phase synthesizer. This process is carried out by Beijing Saibaisheng Gene Co., Ltd.

[0035] EXAMPLES The entire screening process was carried out in a surface plasmon resonance instrument Biacore T200.

[0036] The screening method is as follows:

[0037] 1. The purified protein TRB3 (purchased from RD Company) was coupled to a CM5 chip (purchased from GE Company) through amino groups, the unbound protein was washed away at a flow rate of 10 μL / min, and the surface of the chip was equilibrated for 2 hours.

[0038] 2. Automatically inject 250 μL of different concentrations of polypeptide fragments (200, 50, 12.5, 6.25 nM), and the whole process is carried out at 25°C. The buffer used was HBS-EP buffer (0.01M HEPES, 0.15M NaCl, 3mM ED...

Embodiment 2

[0044] Example 2 The ELISA method verifies the binding of peptides B1, A2 and B3 to protein TRB3.

[0045] The specific operation steps are as follows:

[0046] 1. Dilute human TRB3 protein and bovine serum albumin (BSA) to 10 μg / ml with PBS, add 100 μl to each well, and coat 96-well ELISA plate overnight at 4°C.

[0047] 2. Wash three times with PBS containing 0.1% Tween-20. Coat the plate with 200 μl of blocking solution (10% bovine serum in PBS), and coat at 37°C for 2 hours.

[0048] 3. Pour off the coating solution, add 200 μl of 1 μg / ml polypeptide B1, A2 and B3 solutions, and set up positive control wells, add 200 μl of 1 μg / ml P62 protein solution, and incubate at 37°C for 1 hour.

[0049] 4. Wash five times with PBS containing 0.1% Tween-20. Add 100 μl anti-M13 monoclonal antibody diluted with blocking solution 1:4000 to each well, and incubate at room temperature for 1 h.

[0050] 5. Wash six times with PBS containing 0.1% Tween-20. Prepare substrate chromogenic...

Embodiment 3

[0053] Example 3 The method of competition ELISA verifies that peptides B1, A2 and B3 can compete for the binding of TRB3 to P62 protein.

[0054] The specific operation steps are as follows:

[0055] 1. Dilute human TRB3 protein and bovine serum albumin (BSA) with PBS to 10 μl / ml, add 100 μl to each well, and coat 96-well ELISA plate overnight at 4°C.

[0056] 2. Wash three times with PBS containing 0.1% Tween-20. Coat the plate with 200 μl of blocking solution (10% bovine serum in PBS), and coat at 37°C for 2 hours.

[0057] 3. Pour off the coating solution, add 200 μl of 1 μg / ml P62 protein solution, and incubate at 37°C for 1 hour.

[0058] 4. Wash five times with PBS containing 0.1% Tween-20. Add 100 μl of horseradish catalase-labeled polypeptides B1, A2 and B3 diluted with blocking solution to each well, and incubate at room temperature for 1 h.

[0059] 5. Wash six times with PBS containing 0.1% Tween-20. Prepare substrate chromogenic solution (100mmol / L sodium ace...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention discloses a polypeptide capable of specifically binding with TRB3 protein, screening method, identification, and applications thereof, and specifically relates to three polypeptide sequences capable of specifically binding with tribbles (TRB3): B1: Ser-Leu-Ser-Gln-Met-Leu-Ser-Met, A2: Gly-Gly-Trp-Leu-Thr-Arg-Leu-Leu-Gln-Thr-Lys, and B3: Ile-Gly-Ala-Ala-Leu-Asp-Thr-Ile. The polypeptide is screened out through a surface plasma resonance (Biacore) method, and is capable of specifically binding with TRB3 and blocking the binding between the TRB3 and P62 protein. At the same time, the derivatives of the polypeptide namely Pep2-B1, Pep2-A2, and Pep2-B3 can inhibit the growth and transfer of the tumor cells. So the polypeptide and the derivatives of the polypeptide can be used as a novel inhibitor on TRB3 and can also be applied to development of vaccines or drugs for inhibiting the growth and transfer of tumor cells.

Description

technical field [0001] The invention relates to a polypeptide capable of binding to human pseudokinase tribbles3 (TRB3) and blocking its binding to P62 protein, belonging to the technical field of medicine. Background technique [0002] Cancer is the "number one killer" of death worldwide. Metastasis is the main cause of cancer death, and more than 90% of cancer patients eventually die of tumor metastasis. Therefore, anti-tumor metastasis is particularly important in tumor therapy. Tumor invasion and metastasis is an extremely complex multi-gene regulatory process, involving a series of abnormal expression and function of invasion and metastasis-related genes. The elucidation of the mechanism of action of these genes and the downstream signal transduction pathway will lay the foundation for molecular diagnosis and individualized treatment of metastatic cancer. [0003] TRB3 (Tribbles Homologue3) is one of the members of the Tribbles homologous protein family. It was first...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Patents(China)
IPC IPC(8): C07K7/06A61K38/08A61P35/00A61P35/02
Inventor 胡卓伟李珂花芳吕晓希余娇娇
Owner INST OF MATERIA MEDICA CHINESE ACAD OF MEDICAL SCI
Features
  • R&D
  • Intellectual Property
  • Life Sciences
  • Materials
  • Tech Scout
Why Patsnap Eureka
  • Unparalleled Data Quality
  • Higher Quality Content
  • 60% Fewer Hallucinations
Social media
Patsnap Eureka Blog
Learn More