Unlock instant, AI-driven research and patent intelligence for your innovation.

One-step dual PCR method for detecting fire blight of pear

A technology of E. amylovora and its detection method, which is applied in biochemical equipment and methods, and the measurement/inspection of microorganisms. It can solve the problems that E. amylovora cannot be detected, meet the requirements of plant quarantine and disease monitoring, and have a simple process. , strong specific effect

Inactive Publication Date: 2006-11-15
INST OF PLANT PROTECTION CHINESE ACAD OF AGRI SCI
View PDF0 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the detection of E. amylovora which does not contain the pEA29 plasmid cannot be carried out

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • One-step dual PCR method for detecting fire blight of pear
  • One-step dual PCR method for detecting fire blight of pear

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0038] Implementation Example 1: Primer primer A / B and primer E / F use E. amylovora pus as a template.

[0039] 1) Preparation of E. amylovora pus template

[0040] To activate the E. amylovora stored at -80°C, first pick the bacterial liquid and put it on the NA medium (3 grams of beef extract, 0.5 grams of yeast extract powder, 5 grams of peptone, 10 grams of glucose, 1000 ml of distilled water, pH 7.0-7.2 ) at 28°C, cultivate for 1-2 days, pick out the pus, and add it directly to the PCR reaction system.

[0041] 2) Synthesis of specific primers for detection of E. amylovora

[0042] Primer A: 5'-CGGTTTTTAACGCTGGG-3';

[0043] Primer B: 5'-GGGCAAATACTCGGATT-3'

[0044] and

[0045] Primer E: 5'-AATAAGGTGCCTGGTAATG-3'

[0046] Primer F: 5'-GGTGGAATGAGACTGGGTA-3' was synthesized by Shanghai Sangon Company.

[0047] 3) PCR amplification reaction

[0048]The primer A / B primer pair and the primer E / F primer pair are simultaneously carried out in the same reaction system fo...

Embodiment 2

[0055] Implementation Example 2: Primer primer A / B and primer primer E / F use the freshly cultured bacterial solution of E. amylovora as a template.

[0056] 1) Use freshly cultured bacteria as a template

[0057] Pick the bacterial pus from the NA medium, add it to the NA liquid medium, and incubate with shaking at 28°C for 1 day, take 1 μl of the bacterial liquid as a template for PCR amplification, and directly add it to the PCR reaction system.

[0058] 2) Synthesis of specific primers for detection of E. amylovora

[0059] Primer A: 5'-CGGTTTTTAACGCTGGG-3';

[0060] Primer B: 5'-GGGCAAATACTCGGATT-3'

[0061] and

[0062] Primer E: 5'-AATAAGGTGCCTGGTAATG-3'

[0063] Primer F: 5'-GGTGGAATGAGACTGGGTA-3' was synthesized by Shanghai Sangon Company.

[0064] 3) PCR amplification reaction

[0065] The primer A / B primer pair and the primer E / F primer pair are simultaneously carried out in the same reaction system for double PCR reaction, in which 10×PCR buffer 5μl, 15mM MgCl...

Embodiment 3

[0072] Implementation Example 3: Primer primerA / B and primer primer E / F detect the sensitivity of E. amylovora and the determination of the minimum amount of detected bacteria

[0073] 1) Use the freshly cultivated bacterial solution as a template to pick bacterial pus from the NA medium, add it to the NA liquid medium, and culture it with shaking at 28°C for 1 day. Take the original bacterial solution and dilute it by 10 1 -10 5 1 μl of bacterial solution was used as a template for PCR amplification, and was directly added to the PCR reaction system.

[0074] 2) Synthesis of specific primers for detection of E. amylovora

[0075] Primer A: 5'-CGGTTTTTAACGCTGGG-3';

[0076] Primer B: 5'-GGGCAAATACTCGGATT-3'

[0077] and

[0078] Primer E: 5'-AATAAGGTGCCTGGTAATG-3'

[0079] Primer F: 5'-GGTGGAATGAGACTGGGTA-3' was synthesized by Shanghai Sangon Company.

[0080] 3) PCR amplification reaction

[0081] The primer A / B primer pair and the primer E / F primer pair are simultaneo...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The one-step double PCR method for detecting E. amylovora of the invention is suitable for detecting E. amylovora. The invention belongs to the field of crop disease control and plant quarantine technology. In this method, two pairs of specific primers are designed according to the pEA29 plasmid of E. amylovora and the ams gene sequence of the genome, and the E. amylovora is detected simultaneously in the same reaction system. The sizes of the amplified products are 1.0 kb and 1.5 kb respectively. The detection sensitivity of the primers reached 3 bacterial cells. It is the supplement and improvement of the specific primer detection method for E. amylovora pEA29 plasmid. E. amylovora strains that do not contain the pEA29 plasmid can also be tested. At the same time, this method adopts double PCR technology, and two pairs of primers are simultaneously amplified in the same reaction system, which improves the detection accuracy and saves detection time, and can be widely promoted in the form of a kit in ports of my country.

Description

(1) Technical field [0001] The "one-step double PCR method for detection of Phytophthora amylovora" of the present invention is specially used for detection of Phytophthora amylovora and belongs to the technical field of crop disease control and plant quarantine. (2) Background technology [0002] Erwina amylovora is a devastating bacterial disease on pears, apples and other Rosaceae plants. It was first discovered in 1780 and is now mainly distributed in Central and North America, Oceania, Europe, West Asia, Egypt, Japan, Korea and more than 40 countries or regions. During the decade from 1951 to 1960, the United States lost an average of $4 million per year. my country has not found the harm of the disease so far, and it is listed as a first-class foreign quarantine object in my country. [0003] Pear fire blight mainly harms flowers, leaves, young shoots, fruits, etc., generally reducing production by 25%. [0004] The cultivation area of ​​fruit trees in my country is...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68
Inventor 冯洁许景升徐进何礼远张争张杨
Owner INST OF PLANT PROTECTION CHINESE ACAD OF AGRI SCI