一种判别G-四链体结构DNA的方法

By analyzing the characteristics of DNA base repeat units and rectangular block diagrams, the problem of the difficulty in quickly identifying G-quadruplex DNA structures in existing technologies has been solved, enabling rapid and accurate DNA structure identification and molecular-level research.

CN116230072BActive Publication Date: 2026-07-17BEIJING ACADEMY OF AGRICULTURE & FORESTRY SCIENCES

Patent Information

Authority / Receiving Office
CN · China
Patent Type
Patents(China)
Current Assignee / Owner
BEIJING ACADEMY OF AGRICULTURE & FORESTRY SCIENCES
Filing Date
2023-01-04
Publication Date
2026-07-17

AI Technical Summary

Technical Problem

Existing technologies are insufficient for rapidly identifying G-quadruplex DNA structures at the molecular level. Current methods can only characterize DNA conformations macroscopically and lack rapid molecular-level identification methods.

Method used

By analyzing the base repeating unit characteristics of the DNA structure to be determined, the effective active region is identified, the base sorting characteristics and rectangular box diagram are drawn, the distribution pattern of the rectangular boxes is determined, and it is determined whether the DNA is a G-quadruplex structure.

Benefits of technology

This technology enables rapid and accurate identification of G-quadruplex DNA structures, reducing analytical difficulty and cost, providing molecular-level research evidence, and supporting research on the recognition mechanism of G-quadruplex DNA interactions with small molecules.

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Abstract

本申请涉及生物分析化学技术领域,尤其涉及一种判别G‑四链体结构DNA的方法;所述方法包括:确定待判定结构DNA的有效活性区域;根据有效活性区域的起始碱基位点和终止碱基位点,确定有效活性区域的碱基总数;根据所述碱基总数,判断所述碱基总数是否为偶数;若是,则绘制碱基位点的分析曲线,并得到碱基排序特征和多个碱基重复单元;根据碱基排序特征,以不同碱基重复单元的碱基G位点为顶点进行矩形框的构建,得到G4碱基框图;根据G4碱基框图,判断所述G4碱基框图中矩形框的分布方式是否为连续分布;若是,则判定待判定结构DNA为G‑四链体结构DNA;上述方法适用于从结构DNA中快速判别出G‑四链体结构DNA。
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