基于泛基因组图谱的结构变异识别方法及系统

By dynamically expanding the pan-genome map and using deep learning models to evaluate structural variations, the problems of insufficient coverage of unknown or individual-specific variations and map fragmentation in existing technologies have been solved, achieving high-precision identification and analysis of structural variations.

CN121884945BActive Publication Date: 2026-07-17XIANGYA HOSPITAL CENT SOUTH UNIV

Patent Information

Authority / Receiving Office
CN · China
Patent Type
Patents(China)
Current Assignee / Owner
XIANGYA HOSPITAL CENT SOUTH UNIV
Filing Date
2026-03-18
Publication Date
2026-07-17

AI Technical Summary

Technical Problem

Existing methods for identifying structural variations based on pan-genome maps rely on existing variation information, making it difficult to cover unknown or individual-specific structural variations. Furthermore, map construction and sample analysis are disconnected, and traditional filtering strategies lack adaptability, making it difficult to meet the needs of high-precision structural variation analysis.

Method used

The pan-genome map is dynamically expanded using third-generation sequencing data. A deep learning model is used to assess the credibility and classify candidate structural variants. The pan-genome map serves as a unified reference framework to reduce reference bias, improve identification accuracy and sensitivity, and incorporate users' own high-quality third-generation sequencing data for personalized analysis.

Benefits of technology

It improves the sensitivity and accuracy of structural variation identification, enhances the ability to capture complex and individual-specific variations, and achieves high reliability and consistency of structural variation results, making it suitable for large-scale sample analysis and various application scenarios.

✦ Generated by Eureka AI based on patent content.

Smart Images

  • Figure CN121884945B_ABST
    Figure CN121884945B_ABST
Patent Text Reader

Abstract

本发明公开了一种基于泛基因组图谱的结构变异识别方法及系统,利用三代测序数据对泛基因组图谱进行扩展 / 增强;接收输入的测序数据,将所述测序数据与扩展 / 增强后的泛基因组图谱进行比对,获得图参考比对结果,基于所述图参考比对结果,识别测序数据中的结构变异,生成候选结构变异集合;采用预先训练的深度学习模型对所述候选结构变异集合进行可信度评估和分类,得到过滤后的高可信度结构变异集合。本发明支持在利用标准泛基因组图谱的基础上,引入用户自有高质量三代测序数据对图谱进行动态构建或扩展,使参考结构能够覆盖更多未知或个体特异的结构变异,从而提高了结构变异识别的灵敏度与准确性,增强了对复杂及个体特异性变异的捕获能力。
Need to check novelty before this filing date? Find Prior Art