https://eureka.patsnap.com/resources/blog/rd-blog/structural-variant-breakpoint-detection-algorithm-patent-landscape/ · Patsnap · data cut-off 2026-10-21 · downloaded from the live page
Patent Landscape · Genomics & Bioinformatics Patent Data

Structural Variant Breakpoint Detection Algorithm Patents

Analysis of 26 patent families on structural variant breakpoint detection algorithms, covering filers, IPC mix and filing trends.

57
Published Records
26
Simple Patent Families
18%
In Force at Cut-off
WO
Leading Jurisdiction

57 published records collapse into 26 simple (DOCDB) families; the difference is the same invention filed in more than one country. In force = 10 of 57 records still granted and maintained at the data cut-off; the rest are pending, withdrawn, refused or lapsed.

  • 26 simple patent families and 57 published records sit behind this search, with no single filer above 2 families, Xi'an Jiaotong University and the University of California each hold 2, the largest count in the listed filers.
  • Bioinformatics classification G16B covers the most of the field, appearing on 80.8% of the 26 families, ahead of C12Q (measuring/testing involving enzymes or DNA) at 46.2% and G06F (digital data processing) at 30.8%.
  • Filings in this set were made across 10 receiving offices, with WIPO (PCT) the largest at 16 published records, followed by China at 11 and the EPO at 10.
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Published byPatsnap Research··6 min readSourced from Patsnap Eureka
Overview

What this dataset covers

This page reports results for the search string ("structural variant" OR "structural variation") AND breakpoint AND detection across title, abstract and claims. It returns 26 simple patent families and 57 published records, with no date limit applied, so the set spans whatever filing years the matching documents happen to carry. The IPC mix sits mostly in G16B (bioinformatics), C12Q (enzyme/DNA measuring and testing) and G06F (digital data processing), reflecting the computational and molecular-biology character of the search terms.

26 families is a small pool. The figures below describe what this particular search returned, not a map of the structural-variant detection field as a whole, treat this as a starting point for a closer search, not a finished picture.

Records vs. families in scope
  1. XI AN JIAOTONG UNIV2
  2. RGT UNIV OF CALIFORNIA2
  3. KONINK NEDERLANDSE AKADE VAN WETENSCHAPPEN1
  4. INDUSTRY UNIVERSITY COOPERATION FOUNDATION HANYANG UNIVERSITY1
  5. GWANGJU INST OF SCI & TECH1
  6. SAGA DX INC1
  7. ROSWELL PARK CANCER INSTITUTE CORPORATION1
  8. YANTAI UNIV1
  9. MEMORIAL SLOAN KETTERING CANCER CENT1
  10. HENAN AGRICULTURAL UNIVERSITY1

Ordered by volume only, not by importance or claim strength. Counted in simple (DOCDB) patent families, so one invention filed in several countries counts once. Names come from Patsnap's standardised assignee field as recorded on each document; subsidiaries and group companies are not merged. The icon before each name is read from the name itself (words such as University, Institute or Ltd); the data carries no organisation-type field, so treat it as a reading aid rather than a classification. 2 rows in this table start with the same name (SAGA DX INC, SAGA DIAGNOSTICS AB). They are left as separate rows, so the largest-filer figure above is per legal entity, not per group. Rows that look related still cannot be added together: one family can name several of them. Filings held by named individuals rather than organisations are removed where they can be identified; that identification is not exhaustive, so an individually held filing can still appear below. Either way those filings stay inside the totals above. This table shows the top 30 of the 30 filers returned for this search; the data endpoint returns at most 100 entities, so even that 30 is not the complete set of filers. A single family can name more than one filer, so these counts overlap and do not add up to the total.

Source: Patsnap Eureka. Assignee ranking and totals. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.Run this in Eureka MCP

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Filing Data

Filing trend and technology composition

Two views of the same 26 families: how published records arrived over time, and which IPC subclasses they carry.

Published records by earliest filing year

Published records range from 1 in 2013 up to a peak of 8, reached in 2022, 2023 and 2024 alike, before reaching 6 in 2026. Years from 2022 onward are still filling in as later-filed applications publish, so this stretch understates its eventual count and should not be read as a drop-off.

Published records by earliest filing year0246812013201420152016201720182019202020218202282023820242025620262022 onwards are shaded as still filling in: a filing is only visible once it publishes, up to 30 months after filing.

Counted in published records by earliest filing year, not de-duplicated into families. A filing is counted in the year it was filed, but it only becomes visible after it publishes: roughly 18 months for most routes, and up to 30 months where a PCT application enters national phase. 2022 onwards are therefore still filling in and are shaded; no growth figure on this page uses them. Because this series counts documents rather than inventions, a rise can mean more inventions or the same inventions filed in more countries; this dataset cannot separate the two.

IPC subclass share of the 26 families

G16B appears on 80.8% of the 26 families, C12Q on 46.2% and G06F on 30.8%. Because a family can carry more than one IPC class, these shares add to more than 100% and are not mutually exclusive groupings.

IPC subclass share of the 26 familiesG16B · Bioinformatics2180.8%C12Q · Measuring & testing involving …1246.2%G06F · Electric digital data processi…830.8%G06N · Computing based on AI models311.5%C12N · Microorganisms & genetic engin…27.7%G16H · Healthcare informatics27.7%A61K · Medicinal preparations13.8%A61P · Therapeutic activity of compou…13.8%Other311.5%

Shares are the percentage of the 26 patent families in scope. One patent family can carry several IPC classes, so the shares add up to more than 100%.

Source: Patsnap Eureka. Filing trend and technology composition. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.

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Example Record

A record from the result set

First Record Returned
US20210327541A12021-10-21

Detection method and detection apparatus for genomic structural variations based on k-mer set in reference genome

INDUSTRY-UNIVERSITY COOPERATION FOUNDATION HANYANG UNIVERSITY

The abstract describes detecting a genomic structural variation using a computer apparatus that compares sample sequence data against a k-mer set built from a reference genome, identifies k-mer reads absent from the reference data, maps those reads back to the reference to determine a breakpoint and candidate region, and predicts a structural variation type from the resulting sequence mapping pattern and breakpoint.This is simply the first record returned under the database's default ordering, not a ranking by citation, breadth or importance. What the granted claims actually require has to be read from the claim set itself, an abstract and a family count cannot establish that.

US20210327541A1, patent drawing 1US20210327541A1, patent drawing 2
View full record

Selected as the first record the search returns under the database default order, then shown in full. It is not ranked by citations, claim breadth or commercial importance, and it is not a judgement about which filing in this space matters most.

Source: Patsnap Eureka. The first record the search returned, shown in full. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.Run this in Eureka MCP
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Key Figures

What the numbers show

Three figures worth sitting with before reading the filer table or the IPC chart.

Dataset size
26 families / 57 records
families vs. published records

Two different counts, same search

The search returns 26 simple patent families (one per invention) and 57 published records (one per publication). A single invention can generate several published records across jurisdictions, which is why the record count runs higher than the family count.

Use the family count for invention-level comparisons, the record count for publication volume.
Joint top filer
2 of 26 families (7.7%)
largest single-row share

No filer above two families

Xi'an Jiaotong University and the University of California each hold 2 of the 26 families (7.7%), the largest count among the listed filers. 30 of the 30 listed filers hold 2 or fewer families each. Filer rows are not de-duplicated across co-filed families, so rows cannot be summed into a combined share.

Figures describe single rows only; no combined or group total is available.
Legal status
10 of 57 (18%)
granted and in force at retrieval

Share granted and in force

10 of the 57 published records (18%) were granted and still in force at the 2026-10-21 retrieval date. Legal status changes continuously and this figure is not broken down by pending, withdrawn, refused or lapsed status.

A snapshot of status at one date, not a success or grant rate.
IPC composition
80.8% in G16B
share of 26 families

Bioinformatics classification G16B leads the IPC mix

G16B appears on 80.8% of the 26 families, C12Q on 46.2% and G06F on 30.8%. Because one family can carry multiple IPC classes, these percentages add to more than 100% and are not exclusive buckets.

Based on IPC subclasses assigned to each family, not a technology taxonomy.
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Source: Patsnap Eureka. Derived observations on the same dataset. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.Run this in Eureka MCP
Next Steps

Going beyond this page

This page is a starting snapshot built from one search string. Confirming scope, status or ownership for any individual record requires reading the primary document.

Read the granted claims directly

A family count or an abstract cannot establish what a patent covers. For any record that matters to a project, pull the granted claim set and prosecution history before drawing a scope conclusion.

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Run a broader or narrower search

This search string is one way to phrase the topic; adjacent terms may surface families this set misses, and the 11 IPC subclasses present here can guide a second pass.

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Check legal status before relying on any one record

Only 10 of 57 records were confirmed granted and in force at retrieval. Status changes continuously, so verify current standing for any specific document rather than relying on this snapshot.

Track status in Eureka
Source: Patsnap Eureka. Suggested next steps. No new data: every figure named here is one of those above. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.Run this in Eureka MCP
FAQ

Common questions

Answers are grounded in the same dataset. Derived from one Patsnap search for Structural Variant Breakpoint Detection Algorithm Patent Landscape, covering all matching records regardless of filing date (the search string sets no date limit), retrieved 2026-10-21. Counts cover published records only and move as new filings publish.Run this in Eureka MCP

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Go past this page: query the whole structural variant breakpoint detection algorithm patent landscape corpus yourself, in your own scope.
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How this page was built, and what the numbers do and do not mean

Search. Every figure on this page comes from one Patsnap search, run once and not edited afterwards. This is the exact search string:

TAC:(("structural variant" OR "structural variation") AND breakpoint AND detection)

Reading the field codes: TAC searches the title, abstract and claims of each record, not the full description. The search string sets no date limit, so the scope is every matching record in the database regardless of when it was filed. It is not restricted to recent years. How this string was built matters for how far the counts can be pushed. It was generated in batch from a topic list rather than hand-crafted for this page, and the result set is not manually screened. A keyword search over title, abstract and claims both over-captures (unrelated filings that happen to use the same words) and under-captures (the same invention written in different words). This page cannot measure either effect, so read every figure here as what this particular string returned, not as what exists in the field. One subclass (G16B) carries 80.8% of the patent families, so this search returned a classification-tight set.

What is being counted. Two different units appear on this page and they are not interchangeable. The filer list and the technology split are counted in simple (DOCDB) patent families: one invention counts once however many countries it was filed in. The total, the jurisdiction split and the filing-year chart are counted in published records: the same invention counts once per publication. For this search that is 57 records and 26 families. Record counts reward filing in many jurisdictions; family counts do not. Shares are only ever taken against a denominator in the same unit, and each one names it.

Who the filers are. Names come from Patsnap's standardised assignee field, as recorded on the documents themselves. They are not rolled up to corporate group: a parent and its subsidiaries appear as separate entries, and a portfolio acquired from another company stays under the name on the document unless the assignment is reflected there. This list is meant to carry organisations, not people. Filings held by a named individual are identified by matching the assignee against the inventors on the same search, and, for names written in Chinese, Japanese or Korean characters, by the name carrying no organisational suffix; those are removed from the list. Neither test is exhaustive: the inventor list it matches against is itself capped, and a personal name written in Latin script with no organisational wording in it cannot be told apart from a short company name by rule. So an individually held filing can still appear in the list. Those filings stay inside every total and share on this page either way, so the listed entries can add up to less than the total. A record shown in full further down still names its assignee exactly as the patent office records it, including where that is a person: that name is how the record is identified and checked. What is left out of the ranking is people as ranked entries, not people as cited sources. The table shows the top 30 of the 30 filers returned, ordered by count alone; the data endpoint returns at most 100 entities, so even that 30 is not every filer. One patent family can name several filers and each is counted separately, so these rows are not slices of a divided whole: adding them together over-counts, and this page deliberately publishes no combined "top five" share for that reason. See every filer, individuals included

Dates. The year chart counts by earliest filing year, not publication year. A filing only becomes visible once it publishes: roughly 18 months for most routes, and up to 30 months where a PCT application enters national phase. Measured across these pages, the year four back from today still holds only about 89% of its eventual count. 2022 onwards are therefore shaded on the chart as still filling in. The data behind this page was retrieved on 2026-10-21.

Legal status. "In force" counts documents whose legal status at retrieval was granted and maintained (10 of 57). Everything else is pending, withdrawn, refused, lapsed or not determinable, and those states are not broken out here because the underlying codes do not separate them cleanly. Legal status changes continuously and is reported per document, not per family. Get the status breakdown in Eureka

Classification. The technology split uses IPC subclasses (four characters, for example H01M). A single record usually carries several, so the shares add up to more than 100% and a record can appear in more than one bar. Subclass is a coarse grouping; it describes the field a record was classified into, not what the claims cover. Break the classes down to subgroup level

Who wrote the words. The tables, charts, counts, shares and patent numbers on this page are produced directly from the search result by a program; none of them are written or estimated by a language model. The surrounding prose, headings, FAQ answers and the answers in the question panel are drafted by a language model that is given those same figures and is not permitted to introduce others. Prose can still mis-describe a correct figure, so where the two disagree, the tables and charts are the record.

Disclaimer. This page is generated from Patsnap Eureka data drawn from a limited snapshot of global patent and scientific-literature records, and is provided for general information and reference only.

Patent data carries limitations that apply to every figure above. Recent filings are under-counted, because an application is not public until roughly 18 months after filing and database loading adds further delay. The search string defines and constrains everything shown: records that use different terminology, or that sit outside the fields searched, are absent and cannot be counted. Applicant names, classification codes, legal-status codes and citation records are taken as recorded and may contain errors, duplicates, omissions or stale entries. Ordering by volume is not a measure of quality, scope, enforceability or commercial value, and a larger portfolio is not a stronger one. As a result, the analysis may be incomplete or inaccurate and may not reflect the full technology landscape.

Nothing on this page constitutes an exhaustive prior-art, novelty, freedom-to-operate, validity or infringement search, nor does it constitute legal, financial, investment, or professional advice, and it should not be relied upon as such. No attorney-client relationship is created by it. Any patent, commercial, or strategic decision should be verified independently against the primary records and reviewed with qualified patent, legal, and domain professionals. Patsnap makes no warranties, express or implied, as to the accuracy, completeness, or fitness for any particular purpose of the information presented.

The question panel. The answers behind the suggested questions on this page were written when the page was generated, not in response to your click. The progress steps that play before an answer appears are an animation of how that analysis was done; nothing is being searched or computed at that moment. Typing your own question instead opens Patsnap Eureka, which does run it live.

Machine translation. Assignee and organisation names originally recorded in Chinese, Japanese or Korean have been rendered into English by an AI translation step so that the tables stay readable. These renderings are best-effort and may not match a company's registered English name; the original name is what the underlying patent record carries, and it is what any Eureka query launched from this page uses.

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