A1PI Purification Ethanol Modulation Lysine Truncation

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

Current alpha1-proteinase inhibitor (A1PI) concentrates for treating A1PI deficiency have varying levels of C-terminal lysine truncation due to manufacturing processes and physiological carboxypeptidase activity, affecting protein stability and efficacy in emphysema treatment.

Innovation Solution

Modulating the ethanol concentration during Cohn fractionation and adding specific carboxypeptidases to control the amount of des-lys alpha1-proteinase inhibitor in A1PI compositions, thereby adjusting the level of C-terminal lysine cleavage to achieve desired therapeutic effects.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Quantity of substance

If Cohn fractionation with ethanol is used to purify A1PI, then A1PI concentration and purity are improved, but C-terminal lysine truncation occurs due to carboxypeptidase activity

Engineering Contradiction:
ImproveA1PI concentrationVSAvoidC-terminal lysine truncation level
Core Design Contradiction:
Quantity of substanceVSManufacturing precision

Solution Approach 1:

The patent applies parameter changes by modulating the ethanol concentration during Cohn fractionation. By adjusting ethanol levels (e.g., using 20% ethanol instead of higher concentrations), the patent controls the activity of carboxypeptidases that cause C-terminal lysine truncation. This allows optimization of both A1PI concentration and the preservation of intact C-terminal lysine residues.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent uses carboxypeptidase inhibitors as intermediary substances to prevent unwanted C-terminal lysine truncation during the purification process. These inhibitors mediate between the purification steps and the protein structure, blocking the harmful enzymatic activity while allowing the beneficial concentration and purification effects to proceed.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Ease of manufacture

If carboxypeptidase activity is present during A1PI purification, then C-terminal lysine cleavage occurs, but this affects protein stability and therapeutic efficacy

Engineering Contradiction:
ImprovePurification processVSAvoidA1PI stability and efficacy
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent introduces carboxypeptidase inhibitors as intermediary substances during the purification process. These inhibitors mediate by blocking the enzymatic activity of carboxypeptidases, thereby preventing C-terminal lysine cleavage while allowing the purification process to continue. This maintains both ease of manufacture and the reliability of A1PI stability and efficacy.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent applies preliminary anti-action by adding carboxypeptidase inhibitors before the purification process begins or at early stages. This preventive measure counteracts the potential harmful effect of carboxypeptidase activity before it can cause significant C-terminal lysine truncation, thereby protecting A1PI integrity throughout the manufacturing process.

Inventive Principle:
Principle #9Preliminary anti-action

3Quantity of substance

If high ethanol concentration is used in Cohn fractionation, then A1PI concentration is improved, but carboxypeptidase activity increases causing more lysine truncation

Engineering Contradiction:
ImproveA1PI concentrationVSAvoidCarboxypeptidase activity
Core Design Contradiction:
Quantity of substanceVSObject-generated harmful factors

Solution Approach 1:

The patent applies parameter changes by optimizing the ethanol concentration parameter during Cohn fractionation. By using moderate ethanol concentrations (e.g., 20%) rather than high concentrations, the patent achieves sufficient A1PI concentration while minimizing the activation of carboxypeptidases that cause harmful lysine truncation. This represents an optimal balance between two competing parameters.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent converts the potential harm of carboxypeptidase activity into a benefit by using carboxypeptidase inhibitors. These inhibitors transform the problematic enzymatic activity into a controlled process, allowing the purification to proceed while preventing unwanted lysine truncation. The harmful effect is neutralized and the process is made beneficial.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach allows for the production of A1PI compositions with controlled levels of des-lys alpha1-proteinase inhibitor, improving serum stability and therapeutic efficacy, particularly in treating familial emphysema by optimizing the balance of A1PI activity and stability.

Implementation Method 1

Cohn fractionation and other downstream processing steps take advantage of the physicochemical properties of A1PI to concentrate A1PI into an intermediate fraction

Methodology Applied
Scientific EffectPrecipitation: Precipitation

Implementation Method 2

Basic carboxypeptidases are a group of enzymes that specifically cleave C-terminal basic amino acids (arginine or lysine) from peptides and proteins

Methodology Applied
Scientific EffectEnzymatic hydrolysis: Hydrolysis

Implementation Method 3

High resolution isoelectric focusing (IEF) analysis of A1PI present in A1PI products has revealed differences in the IEF band pattern of glycolsoforms

Methodology Applied
Scientific EffectElectrophoresis: Electrophoresis

Data Source

PatentUS9512172B2Ethanol dependence of alpha1 antitrypsin C-terminal Lys truncation by basic carboxypeptidases
Publication Date: 2016.12.06 BAXALTA GMBH
  • US9512172B2 patent drawing
  • US9512172B2 patent drawing
  • US9512172B2 patent drawing

AI summary

Methods of preparing alpha-1-antiproteinase inhibitor and controlling the amount of des-lys alpha-1-antiproteinase inhibitor in the preparation, and compositions comprising the same, as well as methods of treatment using the same are provided.