AAV Vector Heat Inactivation Buffer

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Solution Overview

Problem

Current methods of heat inactivation for helper viruses during AAV vector production often result in the destruction or degradation of AAV vector genomes, particularly for larger genomes, leading to reduced quality and quantity of recovered AAV vectors.

Innovation Solution

The method involves heating a sample containing both AAV and helper virus particles in the presence of a buffer with kosmotropic salts or divalent/trivalent cations to selectively inactivate the helper virus while preserving AAV integrity, using temperatures between 45°C and 65°C and varying heating times, with specific conditions optimizing the preservation of AAV particles.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If heat inactivation is applied to helper virus particles, then helper virus is inactivated, but AAV vector genome is destroyed or degraded

Engineering Contradiction:
Improvehelper virus inactivationVSAvoidAAV vector genome integrity
Core Design Contradiction:
ReliabilityVSStability of the object's composition

Solution Approach 1:

The patent applies parameter changes by modifying the chemical environment (adding kosmotropic salts or divalent/trivalent cations) during heat inactivation to selectively protect AAV vectors while inactivating helper viruses. This changes the thermal stability parameters of the viral particles in the sample.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent uses kosmotropic salts or divalent/trivalent cations as intermediary substances that mediate the heat inactivation process. These intermediaries bind to helper virus particles and stabilize them against thermal degradation, while having minimal effect on AAV vector particles, thus enabling selective inactivation.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If higher temperature is used for heat inactivation, then helper virus inactivation is enhanced, but AAV vector degradation is increased

Engineering Contradiction:
Improvehelper virus inactivation efficiencyVSAvoidAAV vector recovery
Core Design Contradiction:
ReliabilityVSLoss of substance

Solution Approach 1:

The patent introduces kosmotropic salts or divalent/trivalent cations as intermediary substances that protect AAV vectors from thermal degradation during high-temperature inactivation of helper viruses. These intermediaries act as thermal shields that allow higher temperatures to be used without compromising AAV vector integrity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent changes the chemical parameters of the buffer system by adding kosmotropic salts or metal cations, which modifies the thermal stability landscape. This allows the system to withstand higher temperatures during inactivation while preserving AAV vector integrity, thus enhancing inactivation efficiency without proportional loss of vector recovery.

Inventive Principle:
Principle #35Parameter changes

3Reliability

If longer heating time is applied, then helper virus inactivation is improved, but AAV vector integrity is compromised

Engineering Contradiction:
Improvehelper virus inactivation completenessVSAvoidAAV vector genome stability
Core Design Contradiction:
ReliabilityVSStability of the object's composition

Solution Approach 1:

The patent uses kosmotropic salts or divalent/trivalent cations as protective intermediaries that shield AAV vector particles from prolonged thermal exposure. These intermediaries stabilize the AAV vector structure during extended heating periods, allowing complete helper virus inactivation without compromising AAV vector genome stability.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent modifies the buffer chemistry by incorporating kosmotropic salts or metal cations, which changes the thermal protection parameters. This chemical modification allows longer heating times to be applied for complete helper virus inactivation while the modified buffer environment protects AAV vectors from thermal damage.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach achieves a significant log reduction of helper virus while maintaining the genomic integrity and biological activity of AAV particles, as demonstrated by increased recovery rates and stability of AAV vectors with intact genomes.

Implementation Method 1

The buffer includes a concentration of 10 mM or greater kosmotropic salts and/or a concentration of 10 mM or greater of divalent or trivalent cations

Methodology Applied
Scientific EffectKosmotropic salt stabilization:

Implementation Method 2

heating, to a temperature greater than or equal to 45° C. a sample containing helper virus particles, AAV particles, and a buffer

Methodology Applied
Scientific EffectThermal stabilization:

Implementation Method 3

heating, to a temperature greater than or equal to 45° C. a sample containing helper virus particles

Methodology Applied
Scientific EffectThermal inactivation: Heat Treatment

Data Source

PatentUS20240252562A1Methods of heat inactivation of adenovirus
Publication Date: 2024.08.01 ULTRAGENYX PHARMACEUTICAL INC
  • US20240252562A1 patent drawing
  • US20240252562A1 patent drawing
  • US20240252562A1 patent drawing

AI summary

The present disclosure generally relates to methods of protecting the genomic integrity and/or biological activity of AAV viral particles in a sample containing both AAV particles and helper virus particles during heat inactivation. The methods include heating, to a temperature greater than or equal to 45° C., a sample containing helper virus particles, AAV particles, and a buffer. The buffer includes a concentration of 10 mM or greater kosmotropic salts and/or a concentration of 10 mM or greater of divalent or trivalent cations.