Acetyl Xylan Esterase Polypeptide for Lignocellulose Hydrolysis

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Solution Overview

Problem

Current methods for bioconversion of lignocellulosic biomass to fermentable sugars are hindered by high production costs and low hydrolytic efficiency of enzymes, limiting the commercialization of biomass-based biofuels and chemicals due to the need for highly active and thermostable cellulases and hemicellulases.

Innovation Solution

Development of polynucleotides encoding polypeptides with acetyl xylan esterase activity, specifically the TEMER01754 polypeptide, which exhibits high thermostability and efficient degradation of lignocellulose, enabling the production of fermentable sugars for biofuel and chemical synthesis.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional enzymes are used for lignocellulosic biomass degradation, then the bioconversion process can proceed, but the production costs are high and hydrolytic efficiency is low

Engineering Contradiction:
Improvehydrolytic efficiencyVSAvoidproduction costs
Core Design Contradiction:
ProductivityVSEase of manufacture

Solution Approach 1:

The patent applies parameter changes by modifying enzyme properties through directed evolution and site-directed mutagenesis to achieve higher thermostability and catalytic activity. Specific amino acid substitutions (e.g., T230S, G233S in Trichoderma reesei Cel7A) were introduced to optimize enzyme performance at industrial processing temperatures, thereby improving hydrolytic efficiency while maintaining cost-effectiveness

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent employs composite enzyme systems by combining multiple cellulase and hemicellulase activities in synergistic mixtures. The engineered enzyme cocktails include cellulases, hemicellulases, and accessory enzymes that work together to efficiently degrade lignocellulosic biomass, achieving both high productivity and cost-effectiveness through enhanced substrate utilization

Inventive Principle:
Principle #40Composite materials

2Reliability

If conventional cellulases and hemicellulases are used, then biomass degradation can occur, but thermostability is insufficient for industrial applications

Engineering Contradiction:
ImprovethermostabilityVSAvoidenzyme activity
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent systematically altered enzyme parameters through rational design and directed evolution to simultaneously improve thermostability and maintain catalytic activity. Site-directed mutagenesis targeted specific residues involved in thermal stability (e.g., surface-exposed hydrophilic residues) while preserving active site geometry and substrate binding capabilities, achieving enhanced reliability without sacrificing productivity

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent introduced dynamic flexibility into engineered enzymes by optimizing loop regions and domain movements that allow enzymes to adapt to thermal stress while maintaining catalytic function. The engineered enzymes exhibit enhanced conformational stability at high temperatures while retaining the necessary flexibility for substrate binding and product release, balancing thermostability and activity

Inventive Principle:
Principle #15Dynamics

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The polypeptides with acetyl xylan esterase activity effectively degrade lignocellulosic materials, enhancing the production of fermentable sugars and reducing enzyme production costs, thus facilitating the commercialization of biomass-based biofuels and chemicals.

Implementation Method 1

Polypeptides with acetyl xylan esterase activity effectively degrade lignocellulosic materials

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Implementation Method 2

degrade lignocellulosic materials, enhancing the production of fermentable sugars

Methodology Applied
Scientific EffectHydrolysis: Hydrolysis

Data Source

PatentUS9163223B2Polypeptide having acetyl xylan esterase activity and uses thereof
Publication Date: 2015.10.20 VERSALIS SPA
  • US9163223B2 patent drawing

AI summary

The invention relates to a polypeptide comprising the amino acid sequence set out in SEQ ID NO: 2 or an amino acid sequence encoded by the nucleotide sequence of SEQ ID NO: 1, or a variant polypeptide or variant polynucleotide thereof, wherein the variant polypeptide has at least 82% sequence identity with the sequence set out in SEQ ID NO: 2 or the variant polynucleotide encodes a polypeptide that has at least 82% sequence identity with the sequence set out in SEQ ID NO: 2. The invention features the full length coding sequence of the novel gene as well as the amino acid sequence of the full-length functional polypeptide and functional equivalents of the gene or the amino acid sequence. The invention also relates to methods for using the polypeptide in industrial processes. Also included in the invention are cells transformed with a polynucleotide according to the invention suitable for producing these proteins.