Activatable Antibody Conjugation via Partial Disulfide Reduction

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Solution Overview

Problem

Existing antibody-based therapeutics face limitations such as rapid clearance from circulation and toxicities due to broad target expression, and there is a need for improved methods of conjugating agents to antibodies without compromising their therapeutic effectiveness.

Innovation Solution

The development of activatable antibodies with masking and cleavable moieties that allow for selective conjugation of agents at specific sites without disturbing disulfide bonds, maintaining the antibody's binding and masking activities.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Adaptability or versatility

If agents are conjugated to antibodies using conventional methods, then the therapeutic and diagnostic functionality is enhanced, but the antibody's binding activity and masking capabilities are compromised

Engineering Contradiction:
Improvetherapeutic and diagnostic functionalityVSAvoidbinding activity and masking capability
Core Design Contradiction:
Adaptability or versatilityVSReliability

Solution Approach 1:

The patent segments the antibody structure by introducing a separate masking moiety (MM) that can be independently controlled from the antibody binding region. This allows the antibody (AB) to maintain its binding capability while the MM provides selective masking, and conjugation can be performed on the AB without affecting the MM's masking function.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent uses a cleavable moiety (CM) as an intermediary element that links the masking moiety to the antibody. The CM is designed to be cleaved by specific proteases, allowing the MM to be released from the AB only when needed. This intermediary enables controlled interaction between components while preserving their individual functionalities.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Productivity

If conventional conjugation methods are used, then agents can be attached to antibodies, but rapid clearance from circulation occurs and toxicities increase

Engineering Contradiction:
Improveagent conjugation efficiencyVSAvoidclearance rate and toxicity
Core Design Contradiction:
ProductivityVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by creating a specific conjugation site on the antibody that is distinct from the binding site and masking site. The antibody is engineered with a specific cysteine residue or reduced disulfide bond location that allows agent attachment without interfering with the binding or masking functions, thereby reducing off-target effects and clearance.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent performs preliminary reduction of specific disulfide bonds in the antibody to create designated conjugation sites before agent attachment. This preliminary action ensures that conjugation occurs at predetermined locations that do not interfere with binding or masking, preventing subsequent loss of function and reducing clearance.

Inventive Principle:
Principle #10Preliminary action

3Adaptability or versatility

If all disulfide bonds are reduced for conjugation, then maximum conjugation sites are available, but the masking and binding activities are lost

Engineering Contradiction:
Improveconjugation site availabilityVSAvoidmasking and binding activity
Core Design Contradiction:
Adaptability or versatilityVSReliability

Solution Approach 1:

The patent applies partial action by selectively reducing only specific disulfide bonds in the antibody rather than all disulfide bonds. This partial reduction creates sufficient conjugation sites for agent attachment while preserving other disulfide bonds that maintain the antibody's binding and masking activities.

Inventive Principle:
Principle #16Partial or excessive action

Solution Approach 2:

The patent creates local quality differences within the antibody structure by reducing only specific disulfide bonds located in regions designated for conjugation, while leaving other disulfide bonds intact in regions critical for binding and masking functions. This spatial differentiation allows simultaneous achievement of conjugation capability and functional preservation.

Inventive Principle:
Principle #3Local quality

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables the creation of conjugated activatable antibodies that retain their masking and binding capabilities, allowing for targeted therapy and diagnosis while minimizing adverse effects.

Implementation Method 1

partially reducing at least one interchain disulfide bond in the activatable antibody with a reducing agent to form at least two interchain thiols

Methodology Applied
Scientific EffectReduction: Reduction

Implementation Method 2

conjugating the agent to the reduced activatable antibody

Methodology Applied
Scientific EffectConjugation: Chemical Bonding

Data Source

PatentUS20250099606A1Compositions and methods for conjugating activatable antibodies
Publication Date: 2025.03.27 CYTOMX THERAPEUTICS INC
  • US20250099606A1 patent drawing
  • US20250099606A1 patent drawing
  • US20250099606A1 patent drawing

AI summary

The invention relates generally to compositions and methods for conjugating antibodies and activatable antibodies, and methods of partially reducing antibodies and/or activatable antibodies prior to conjugation, e.g., thiol-based conjugation, with an agent, e.g., a therapeutic and/or diagnostic agent.