Cation Exchange Flow-Through Purification for ADC vHMWS Reduction

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Solution Overview

Problem

The purification of antibody drug conjugates (ADCs) using cation-exchange chromatography in flow-through mode is challenging due to the risk of protein aggregation, particularly very high molecular weight species (vHMWS), which can lead to immunogenicity and require stringent control of the Drug-to-Antibody Ratio (DAR) and drug load distribution, while existing methods like Bind-Elute and Overload Chromatography face limitations in yield and facility fit, and High-throughput Screening is not suitable for handling cytotoxic compounds.

Innovation Solution

A method involving a first purification of the antibody intermediate using cation exchange chromatography followed by a second purification of the crude ADC in flow-through mode with specific conditions for load density, buffer species, pH, and conductivity to reduce vHMWS concentration by at least 85% without altering critical quality attributes, using resins like POROS 50HS, POROS XS, and SPFF, and leveraging High-throughput Screening to determine binding behavior for optimal conditions.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If Bind-Elute chromatography is used for ADC purification, then product purity is improved, but column load density is reduced and facility footprint increases

Engineering Contradiction:
Improveproduct purityVSAvoidcolumn load density
Core Design Contradiction:
Manufacturing precisionVSProductivity

Solution Approach 1:

The patent inverts the traditional Bind-Elute approach by using Flow-Through mode where the antibody intermediate binds to the cation exchange column and impurities flow through, or alternatively where the ADC flows through while aggregates bind. This inversion allows high load density operation while achieving purity through selective binding behavior at elevated pH conditions specific to ADCs.

Inventive Principle:
Principle #13The other way round (Inversion)

2Productivity

If Flow-Through chromatography is used for ADC purification, then column load density is improved, but aggregate removal efficiency may be reduced

Engineering Contradiction:
Improvecolumn load densityVSAvoidaggregate removal efficiency
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The patent exploits parameter changes by operating at elevated pH conditions (typically pH 7.0-9.0) that are specific to ADC stability requirements. At these elevated pH values, the binding behavior of aggregates versus monomeric ADC changes significantly on cation exchange resins, enabling selective retention of aggregates while ADC flows through, or vice versa, achieving both high load density and effective aggregate removal.

Inventive Principle:
Principle #35Parameter changes

3Productivity

If High-throughput Screening is used for method development, then screening efficiency is improved, but safety risks increase due to cytotoxic compound handling

Engineering Contradiction:
Improvescreening efficiencyVSAvoidsafety risks from cytotoxic compounds
Core Design Contradiction:
ProductivityVSObject-affected harmful factors

Solution Approach 1:

The patent extracts the cytotoxic drug component from the screening process by using the antibody intermediate (without drug conjugation) for High-Throughput Screening of chromatography conditions. The screened conditions are then validated with the actual ADC in reduced-scale experiments, eliminating the need for large-scale handling of cytotoxic compounds during method development while still achieving efficient condition optimization.

Inventive Principle:
Principle #2Taking out (Extraction)

4Productivity

If reaction conditions for ADC formation are used, then conjugation efficiency is improved, but protein aggregation increases

Engineering Contradiction:
Improveconjugation efficiencyVSAvoidaggregate formation
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The patent applies preliminary purification of the antibody intermediate using cation exchange chromatography before conjugation to remove potential aggregating impurities. Additionally, a post-conjugation Flow-Through purification step is implemented that specifically targets and removes aggregates formed during the conjugation reaction, allowing the use of efficient conjugation conditions while controlling aggregate levels in the final product.

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach significantly reduces vHMWS to less than 0.1% in the ADC, maintains high yields, and does not change the critical quality attributes of the ADC product, providing a robust and cost-effective purification step for ADCs.

Implementation Method 1

performing a second purification of the crude preparation with cation exchange chromatography material in flow-through mode

Methodology Applied
Scientific EffectCation exchange: Ion Exchange

Data Source

PatentUS20240277859A1Flow through cation exchange chromatography purification processes for antibody drug conjugates
Publication Date: 2024.08.22 GENENTECH INC
  • US20240277859A1 patent drawing
  • US20240277859A1 patent drawing
  • US20240277859A1 patent drawing

AI summary

The present invention relates to a method of developing purification processes for antibody drug conjugates using cation-exchange chromatography in flow-through mode leveraging the purification conditions of the antibody intermediate without a change to the critical quality attributes (CQA) of the ADC.