AI Synthesis Pathway Planning With Reaction Feasibility Ranking

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Solution Overview

Problem

The process of determining chemical synthesis pathways for drug development is inefficient and prone to errors, requiring chemists to manually review numerous scientific papers, making it a bottleneck in drug discovery.

Innovation Solution

An AI-driven system that rapidly designs chemical syntheses by generating novel intermediate reactions, utilizing deep learning to propose synthesis pathways within seconds, and ranking them based on user-defined criteria, including cost and feasibility, to efficiently determine viable synthesis routes for target molecules.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If chemists manually review scientific papers to determine synthesis pathways, then they can find substrates that react to yield target molecules, but the process is highly inefficient and time-consuming

Engineering Contradiction:
Improveaccuracy of synthesis pathway determinationVSAvoidtime required for synthesis pathway determination
Core Design Contradiction:
ReliabilityVSLoss of time

Solution Approach 1:

The patent replaces the manual mechanical process of chemists reviewing scientific papers with an automated computer-based system that uses machine learning models and natural language processing to extract reaction information from literature, thereby eliminating the time-consuming manual effort while maintaining or improving accuracy

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent introduces an intermediary automated system that acts as a bridge between scientific literature and synthesis pathway determination, using trained models to process and interpret reaction data from papers, thus freeing chemists from direct manual review while preserving the ability to accurately identify viable synthesis routes

Inventive Principle:
Principle #24Intermediary (Mediator)

2Reliability

If chemists manually determine synthesis pathways by reviewing numerous papers, then they can identify viable reactions, but the process is prone to errors

Engineering Contradiction:
Improveaccuracy of synthesis pathway determinationVSAvoidefficiency of molecule-making process
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent replaces the error-prone manual process with an automated computer-based system that consistently applies trained machine learning models to evaluate reactions, eliminating human fatigue and inconsistency while improving both accuracy and throughput of synthesis pathway determination

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent implements feedback mechanisms where the system learns from training data and continuously improves its ability to identify viable reactions, using iterative optimization to reduce errors and improve reliability of synthesis pathway recommendations

Inventive Principle:
Principle #23Feedback

3Productivity

If an automated system is introduced to speed up synthesis pathway determination, then productivity increases, but the complexity of the system increases

Engineering Contradiction:
Improvespeed of synthesis pathway determinationVSAvoidcomplexity of automated determination system
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent divides the complex automated system into modular components including separate modules for text extraction, reaction identification, feasibility assessment, and pathway optimization, allowing each component to be independently developed, tested, and maintained while collectively achieving high productivity

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent creates a multi-functional automated system that can process different types of scientific literature, identify various reaction types, assess feasibility using multiple criteria, and generate comprehensive synthesis pathways, thereby achieving high productivity through a single versatile platform

Inventive Principle:
Principle #6Universality (Multi-functionality)

Data Source

PatentUS20210125691A1Systems and method for designing organic synthesis pathways for desired organic molecules
Publication Date: 2021.04.29 MOLECULE ONE SP ZOO
  • US20210125691A1 patent drawing
  • US20210125691A1 patent drawing
  • US20210125691A1 patent drawing

AI summary

Methods and systems provide proposed pathways for synthesizing chemical reactions given a user-proposed target molecule, user-provided reaction constraints, or a combination of both. Embodiments may leverage training the model using both known successful reactions and infeasible reactions, either known or created by a prior use of the model. Chemical reactions for producing the target molecule and substrates are proposed using the model. From the proposed reactions, synthesis pathways are extracted and ranked according to a cost estimation. The ranked synthesis pathways are then provided to the user.