Alg3 Inactivation and LaeA Overexpression in Aspergillus niger

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Solution Overview

Problem

Current methods for citric acid production in Aspergillus niger do not fully optimize carbohydrate conversion to citric acid, as they do not effectively alter post-translation modifications like N-glycosylation, which can impact metabolic pathways and product output.

Innovation Solution

Genetic inactivation of the dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase (Alg3) gene and/or overexpression of the LaeA gene to enhance citric acid production by altering protein glycosylation and metabolic flux in Aspergillus niger.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional citric acid production methods are used in Aspergillus niger, then stable biomass production is maintained, but citric acid production efficiency is not optimized due to unaltered post-translation modifications

Engineering Contradiction:
Improvecitric acid production efficiencyVSAvoidmetabolic pathway complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent applies parameter changes by genetically modifying the Aspergillus niger strain through inactivation of the Alg3 gene and overexpression of the LaeA gene. These genetic parameter changes alter the post-translation modification parameters (N-glycosylation patterns) of cellular proteins, which in turn optimizes metabolic flux toward citric acid production. The modified strain achieves enhanced citric acid production efficiency by changing the biochemical parameters of protein glycosylation without requiring complex external control systems.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If protein glycosylation is enhanced to improve cellular formation, then metabolic regulation is improved, but citric acid production is reduced due to increased carbohydrate consumption for glycosylation

Engineering Contradiction:
Improvemetabolic regulationVSAvoidcitric acid production
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent applies inversion by reversing the conventional approach to protein glycosylation. Instead of enhancing glycosylation to improve cellular formation (which would consume more carbohydrates and reduce citric acid production), the patent inactivates the Alg3 gene to reduce N-glycosylation. This inverse approach decreases carbohydrate consumption for glycosylation, thereby redirecting metabolic flux toward citric acid production while maintaining sufficient metabolic regulation through the LaeA overexpression.

Inventive Principle:
Principle #13The other way round (Inversion)

3Productivity

If Alg3 gene is inactivated to reduce N-glycosylation, then carbohydrate flux to citric acid is increased, but protein secretion and stability may be affected

Engineering Contradiction:
Improvecarbohydrate conversion to citric acidVSAvoidprotein function
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent uses LaeA as an intermediary to compensate for the potential negative effects of Alg3 inactivation. The LaeA gene overexpression acts as a mediator that maintains protein secretion and stability functions even when N-glycosylation is reduced due to Alg3 deficiency. This intermediary approach allows the system to achieve enhanced carbohydrate flux to citric acid while preserving essential protein functions through the compensatory action of LaeA.

Inventive Principle:
Principle #24Intermediary (Mediator)

Data Source

PatentUS9023637B2Enhanced citric acid production in <i>Aspergillus </i>with inactivated asparagine-linked glycosylation protein 3 (Alg3), and/or increased LaeA expression
Publication Date: 2015.05.05 BATTELLE MEMORIAL INST
  • US9023637B2 patent drawing
  • US9023637B2 patent drawing
  • US9023637B2 patent drawing

AI summary

Provided herein are fungi, such as Aspergillus niger, having a dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase (Alg3) gene genetic inactivation, increased expression of a loss of aflR expression A (Lae), or both. In some examples, such mutants have several phenotypes, including an increased production of citric acid relative to the parental strain. Methods of using the disclosed fungi to make citric acid are also provided, as are compositions and kits including the disclosed fungi.