Alpha-Amylase Polypeptides for Starch Conversion

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Solution Overview

Problem

Current processes for producing fermentation products from starch-containing materials, such as ethanol, suffer from low yield due to unconverted residual starch material, often resulting in non-fermentable Maillard products.

Innovation Solution

The development of isolated or purified polypeptides with alpha-amylase activity, specifically designed for high sequence identity to certain SEQ IDs, which are used in processes involving liquefaction, saccharification, and fermentation to enhance the conversion of starch into fermentation products.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional alpha-amylase is used in starch liquefaction, then the starch processing can be carried out, but residual starch material remains unconverted and forms non-fermentable Maillard products

Engineering Contradiction:
Improvefermentation product yieldVSAvoidresidual starch material
Core Design Contradiction:
ProductivityVSLoss of substance

Solution Approach 1:

The patent modifies the alpha-amylase enzyme sequence by introducing specific amino acid changes (e.g., at positions 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100) to enhance its catalytic activity and substrate binding affinity, thereby improving starch conversion efficiency and reducing residual starch material

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent creates a composite enzyme system by combining the modified alpha-amylase polypeptide with other enzymatic components (such as glucoamylase and fermentation organisms) to achieve synergistic effects that maximize starch conversion to fermentable sugars and subsequent fermentation products

Inventive Principle:
Principle #40Composite materials

2Productivity

If high sequence identity polypeptides are developed to improve starch breakdown, then fermentation product yield increases, but the complexity of enzyme production and purification increases

Engineering Contradiction:
Improvefermentation product yieldVSAvoidpolypeptide production and purification process
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent uses recombinant DNA technology to copy and amplify the modified alpha-amylase gene in host organisms (such as E. coli or yeast), enabling large-scale production of the enzyme through microbial fermentation rather than complex chemical synthesis or traditional enzyme extraction methods

Inventive Principle:
Principle #26Copying

Solution Approach 2:

The patent extracts and purifies the functional alpha-amylase polypeptide from the recombinant host cell through standardized purification protocols, isolating the enzyme activity while removing cellular debris and other contaminants, thereby simplifying the overall production process

Inventive Principle:
Principle #2Taking out (Extraction)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

These polypeptides improve the yield of fermentation products by effectively breaking down starch, reducing residual starch, and increasing the efficiency of the fermentation process.

Implementation Method 1

Alpha-amylases (alpha-1,4-glucan-4-glucanohydrolases, E.C. 3.2.1.1) constitute a group of enzymes, which catalyze hydrolysis of starch and other linear and branched 1,4-glucosidic oligo- and polysaccharides

Methodology Applied
Scientific EffectHydrolysis: Hydrolysis

Implementation Method 2

The present invention provides isolated or purified polypeptides having alpha-amylase activity and polynucleotides encoding the polypeptides

Methodology Applied
Scientific EffectEnzyme binding: Enzyme

Data Source

PatentUS20240228996A1Polypeptides having alpha-amylase activity and polynucleotides encoding same
Publication Date: 2024.07.11 NOVOZYMES AS
  • US20240228996A1 patent drawing
  • US20240228996A1 patent drawing
  • US20240228996A1 patent drawing

AI summary

The present invention relates to polypeptides having alpha-amylase activity, alpha-amylase catalytic domains, and starch binding modules, and polynucleotides encoding the polypeptides, alpha-amylase catalytic domains, and starch binding modules, and to nucleic acid constructs, vectors, and host cells comprising the polynucleotides as well as methods of producing and using the polypeptides, alpha-amylase catalytic domains, and starch binding modules. The present invention relates to processes for producing fermentation products from starch-containing material. The invention also relates to an enzyme blend or composition, or a recombinant host cell or fermenting organism suitable for use in a process of the invention.