Self-Assembling Alpha-Helix Fusion Proteins for Simple Purification

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Solution Overview

Problem

Conventional recombinant protein purification methods are time-consuming, complex, and costly due to the use of expensive beads or resins, and require multistep processes, making scale-up difficult and increasing production costs.

Innovation Solution

A fusion protein comprising an alpha-helix peptide tag with charged and hydrophobic amino acids forms self-assembly under specific inducer or condition treatment, allowing purification through simple methods like centrifugation or filtration without the need for expensive beads or resins.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional purification methods using His tag and Ni2+ beads are employed, then recombinant proteins can be purified through affinity chromatography, but the process requires expensive beads or resins, multiple steps, and complex equipment

Engineering Contradiction:
Improvepurification effectivenessVSAvoidpurification process complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The invention extracts and eliminates the need for expensive beads, resins, and complex chromatography equipment by using a purified alpha-helix tag that self-assembles into macromolecular structures. The tag alone (without requiring additional purification matrices) enables direct centrifugal or filtration-based separation, removing the disturbing elements of conventional methods while preserving purification effectiveness.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The alpha-helix tag is designed as a simple, inexpensive peptide sequence that can be easily synthesized and incorporated into the fusion protein. Unlike expensive, reusable beads and resins, the tag is a disposable molecular component that performs its purification function through self-assembly and can be removed after purification, eliminating the need for costly equipment and materials.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

2Manufacturing precision

If conventional multistep purification processes are used, then high purity recombinant proteins can be obtained, but the process consumes a lot of time and requires expensive equipment

Engineering Contradiction:
Improveprotein purityVSAvoidpurification time
Core Design Contradiction:
Manufacturing precisionVSLoss of time

Solution Approach 1:

The alpha-helix tag is pre-designed with specific amino acid sequences (rich in charged and hydrophobic residues) that enable spontaneous self-assembly into macromolecular structures under physiological conditions. This preliminary structural design allows the tag to automatically form purifiable complexes without requiring multiple purification steps, equipment, or time-consuming procedures, achieving high purity through pre-programmed molecular behavior.

Inventive Principle:
Principle #10Preliminary action

3Reliability

If expensive beads or resins are used for purification, then recombinant proteins can be separated effectively, but the production costs increase significantly

Engineering Contradiction:
Improvepurification effectivenessVSAvoidproduction cost
Core Design Contradiction:
ReliabilityVSQuantity of substance

Solution Approach 1:

Instead of using expensive physical beads or resins as purification matrices, the invention creates a molecular copy or analogue of the purification function through the alpha-helix tag's self-assembling properties. The tag replicates the affinity and separation capabilities of conventional methods but uses only simple amino acid sequences, eliminating the need for costly materials while maintaining purification effectiveness.

Inventive Principle:
Principle #26Copying

4Productivity

If conventional affinity chromatography methods are employed, then recombinant proteins can be purified with high efficiency, but the process requires complex equipment and multiple steps

Engineering Contradiction:
Improvepurification efficiencyVSAvoidoperational simplicity
Core Design Contradiction:
ProductivityVSEase of operation

Solution Approach 1:

The alpha-helix tag performs the purification function autonomously through its inherent self-assembling properties. The tag automatically forms macromolecular complexes under physiological conditions, enabling direct separation by centrifugation or filtration without requiring complex chromatography equipment or multiple operational steps. The system serves itself by using the tag's intrinsic molecular properties to achieve purification, eliminating the need for external equipment and complex procedures.

Inventive Principle:
Principle #25Self-service

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables rapid, high-purity, and efficient purification of recombinant proteins with reduced costs by inducing macromolecular assembly, which can be easily converted back to monomers for tag removal.

Implementation Method 1

A fusion protein comprising an alpha-helix peptide tag with charged and hydrophobic amino acids forms self-assembly under specific inducer or condition treatment

Methodology Applied
Scientific EffectSelf-assembly: Self-Assembly

Data Source

PatentEP4596571A1Fusion protein capable of self-assembly by comprising purification tag and ?-helix tag, and method for purifying recombinant protein by using same
Publication Date: 2025.08.06 CCRIPO INC
  • EP4596571A1 patent drawingFigure 1a
  • EP4596571A1 patent drawingFigure 1b
  • EP4596571A1 patent drawingFigure 1c

AI summary

The present invention relates to a fusion polypeptide and a method for purifying a target protein by using same, the polypeptide having any one from among a His tag, a HAT tag and an HQ tag, and an α-helix peptide tag of which the major amino acids are charged and hydrophobic amino acids. Since the fusion polypeptide has an ability to induce self-assembly by being fused with the target protein, the target protein purification method using same enables the isolation and purification of the target protein merely through very simple processes such as centrifugation or filtration.