Antibody Variant Combinations for Reduced Toxicity

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Solution Overview

Problem

Current antibody combination therapies may still exhibit residual activity against healthy cells that express only one of the target antigens, leading to undesired toxicity and a limited therapeutic window.

Innovation Solution

Engineering antibodies with specific Fc region modifications, such as substitutions at positions E430, E345, K248E, T437R, K439E, and S440K, and removing N-linked glycosylation at position N297, to enhance hetero-oligomerization while reducing self-oligomerization and maintaining efficacy on cells expressing both antigens.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Object-affected harmful factors

If Fc region modifications are introduced to enhance hetero-oligomerization between two antibodies, then selectivity for cells co-expressing both antigens is improved, but self-oligomerization of individual antibodies may still occur leading to residual toxicity against healthy cells

Engineering Contradiction:
Improvetoxicity to healthy cellsVSAvoidselectivity for target cells
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent introduces asymmetric Fc region modifications where the first antibody contains a modification at position E430 (e.g., E430G) while the second antibody contains a modification at position E345 (e.g., E345R). This asymmetric design creates complementary Fc regions that preferentially hetero-oligomerize with each other rather than self-oligomerize, thereby reducing residual toxicity to healthy cells while maintaining selectivity for target cells co-expressing both antigens.

Inventive Principle:
Principle #4Asymmetry

Solution Approach 2:

The patent applies local quality by introducing specific point mutations at defined positions (E430, E345, K248, T437, K439, S440) within the Fc region to create localized changes in oligomerization propensity. These localized modifications at specific amino acid positions enable differential oligomerization behavior without affecting the overall antibody structure or antigen binding capabilities.

Inventive Principle:
Principle #3Local quality

2Object-affected harmful factors

If N-linked glycosylation at position N297 is removed to reduce effector functions, then toxicity is reduced, but antibody stability and half-life may be affected

Engineering Contradiction:
Improvetoxicity to healthy cellsVSAvoidantibody half-life
Core Design Contradiction:
Object-affected harmful factorsVSDuration of action of stationary object

Solution Approach 1:

The patent removes the N-linked glycosylation at position N297 from the Fc region of the antibodies. This extraction of the glycan moiety eliminates the primary site for effector function mediation, thereby reducing toxicity to healthy cells. The patent compensates for potential stability and half-life issues through the asymmetric Fc region modifications that enhance hetero-oligomerization, providing an alternative mechanism for therapeutic efficacy.

Inventive Principle:
Principle #2Taking out (Extraction)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach significantly reduces toxicity to healthy cells while maintaining potent activity against target cells co-expressing both antigens, thereby improving the therapeutic window of antibody treatments.

Implementation Method 1

The hexamerization is mediated through intermolecular non-covalent Fc-Fc interactions, and Fc-Fc interactions can be enhanced by point mutations in the CH3 domain, including E345R and E430G.

Methodology Applied
Scientific EffectNon-covalent interactions:

Implementation Method 2

C1q is a multimeric protein consisting of six globular binding heads attached to a stalk. The individual globular binding heads have low affinity for IgG, and C1q must gain avidity by binding multiple IgG1 molecules on a cell surface to trigger the classical complement pathway.

Methodology Applied
Scientific EffectAvidity binding:

Implementation Method 3

ADCC and ADCP are initiated by binding of the IgG Fc region to Fcγ receptors (FcγR) on effector cells.

Methodology Applied
Scientific EffectReceptor-ligand binding:

Implementation Method 4

The employment of effector functions by IgG antibodies is dependent on glycosylation status. The Fc region of IgG antibodies contains a highly conserved N-glycosylation site at amino acid position N297.

Methodology Applied
Scientific EffectN-glycosylation:

Data Source

PatentUS20220411529A1Antibody variant combinations and uses thereof
Publication Date: 2022.12.29 GENMAB BV
  • US20220411529A1 patent drawing
  • US20220411529A1 patent drawing
  • US20220411529A1 patent drawing

AI summary

The invention relates to combination therapy involving two or more antibodies, wherein the Fc regions of the two antibodies have been modified such that hetero-oligomerization between the antibodies is strongly favored over self-oligomerization when antibodies are bound to their corresponding target antigens and such that hetero-oligomerization-independent effector functions of one or both antibodies are eliminated or strongly reduced. The invention also relates to antibodies, compositions, and kits suitable for use in the combination therapy of the invention.