Antiviral Antisense Oligomer Targeting SARS-CoV-2 Genome

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Solution Overview

Problem

There is a lack of established therapies for SARS-CoV-2, SARS-CoV-1, and MERS-CoV, which are part of the same genus Betacoronavirus and cause viral infectious diseases.

Innovation Solution

Development of an antisense oligomer targeting specific regions of the genome RNA of SARS-CoV-2, which is complementary to sequences in regions such as the 5′ UTR, nsp1, nsp10, RNA-dependent RNA polymerase, ORF10, and 3′ UTR, to inhibit viral replication.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If existing antiviral agents are used against SARS-CoV-2, then treatment is attempted, but clinical effectiveness is unproven and no established therapy exists

Engineering Contradiction:
Improveclinical effectivenessVSAvoidestablished therapy
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent changes the fundamental parameter of antiviral approach by using antisense oligomers with specific base sequences (15-30 bases) complementary to target regions in the viral genome RNA. This molecular-level parameter change enables direct interference with viral replication mechanisms, achieving both reliability in effectiveness and ease in establishing a new therapy framework.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent extracts and targets specific functional regions of the viral genome (5' UTR, nsp1, nsp10, RNA-dependent RNA polymerase, ORF10, 3' UTR) to disrupt essential viral processes. By isolating and attacking these critical regions, the therapy achieves reliable antiviral effects while providing a clear pathway for establishing treatment protocols.

Inventive Principle:
Principle #2Taking out (Extraction)

2Adaptability or versatility

If no established therapy exists for SARS-CoV-2, SARS-CoV-1, and MERS-CoV, then new therapeutic agents are desired, but development time and validation are required

Engineering Contradiction:
Improvetherapeutic coverageVSAvoiddevelopment time
Core Design Contradiction:
Adaptability or versatilityVSLoss of time

Solution Approach 1:

The patent achieves universality by designing antisense oligomers that can target multiple coronavirus strains (SARS-CoV-2, SARS-CoV-1, MERS-CoV) through conservation of specific genomic regions. The same therapeutic approach and molecular mechanism apply across all three viruses, enabling broad spectral coverage without requiring separate development timelines for each pathogen.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent performs preliminary action by identifying and targeting conserved regions in the viral genomes before full-scale therapeutic deployment. The selection of target regions (5' UTR, nsp1, nsp10, RNA-dependent RNA polymerase, ORF10, 3' UTR) is based on pre-characterized viral genetics, allowing rapid progression from concept to clinical application across different coronavirus strains.

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The antisense oligomer demonstrates antiviral effects on SARS-CoV-2, SARS-CoV-1, and MERS-CoV, potentially providing a therapeutic and prophylactic option with high inhibitory effects on viral growth and minimal side effects.

Implementation Method 1

comprising a base sequence complementary to a base sequence in a target region

Methodology Applied
Scientific EffectBase pairing: Chemical Bonding

Data Source

PatentUS20250188469A1Antiviral antisense oligomer
Publication Date: 2025.06.12 NIPPON SHINYAKU CO LTD
  • US20250188469A1 patent drawing
  • US20250188469A1 patent drawing
  • US20250188469A1 patent drawing

AI summary

The present specification provides an antisense oligomer, or a pharmaceutically acceptable salt thereof, or a hydrate of the antisense oligomer or the salt having a length of 15 to 30 bases, comprising a base sequence complementary to a base sequence in a target region, wherein the target region comprises a sequence of at least 10 consecutive bases in at least one region selected from the group consisting of a 5′ UTR region, a nsp1 region, a nsp10 region, an RNA-dependent RNA polymerase region, an ORF10 region, and a 3′ UTR region in the genome RNA of SARS-CoV-2, or a complementary sequence thereof, wherein the antisense oligomer, or the pharmaceutically acceptable salt thereof, or the hydrate of the antisense oligomer or the salt has an antiviral effect on a virus selected from the group consisting of SARS-CoV-2, SARS-CoV-1, and MERS-CoV.