Aptamer-Coated Magnetic Bead Structure for Clean Nucleic Acid Extraction

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Solution Overview

Problem

Existing biological material extraction methods using magnetic beads face issues such as decreased efficiency due to detachment of bound materials, aggregation, and elution of metal ions, which affect the accuracy and yield of nucleic acid extraction.

Innovation Solution

A magnetic bead structure comprising a magnetic metal particle coated with an inorganic oxide layer, a base layer acting as a gold ion reducing agent or catalyst, a gold layer, and an immobilization layer with a self-assembling aptamer, enhancing dispersibility and reducing metal ion elution.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If a magnetic bead is used for biological material extraction, then magnetic separation capability is improved, but metal ions may elute into the dispersion medium and inhibit examination of the biological material

Engineering Contradiction:
Improveexamination accuracyVSAvoidmetal ion elution
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The coating is divided into multiple functional layers: an inorganic oxide layer (first coating) that prevents metal ion elution from the magnetic metal particle, and an organic polymer layer (second coating) that provides biocompatibility and binding functionality. This segmentation isolates the harmful magnetic metal core from the biological environment while maintaining extraction functionality.

Inventive Principle:
Principle #1Segmentation

2Reliability

If a colloid holding ligand is used for biological material extraction, then binding ability is improved, but dispersibility in dispersion medium decreases and efficiency of capturing biological material decreases

Engineering Contradiction:
Improvebinding abilityVSAvoidextraction efficiency
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The extraction carrier is constructed as a composite material system combining magnetic metal particles (for magnetic separation) with an organic polymer coating (for biocompatibility and binding). This composite structure enables both high dispersibility in aqueous media and effective biological material binding, resolving the contradiction between binding ability and extraction efficiency.

Inventive Principle:
Principle #40Composite materials

3Productivity

If physical and chemical loads are applied to the extraction carrier during biological material extraction, then extraction capability is improved, but the biological material bound to the carrier may detach or the carrier may aggregate

Engineering Contradiction:
Improveextraction capabilityVSAvoidcarrier stability
Core Design Contradiction:
ProductivityVSStability of the object's composition

Solution Approach 1:

The organic polymer coating is designed beforehand to provide a protective cushion between the magnetic metal particle and the biological material. This cushioning layer absorbs physical and chemical stresses during extraction procedures, preventing both carrier aggregation and biological material detachment while maintaining extraction capability.

Inventive Principle:
Principle #11Beforehand cushioning (Prior cushioning)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The proposed magnetic bead design improves biological material extraction efficiency by maintaining high dispersibility and preventing metal ion elution, thereby ensuring accurate and reliable extraction of nucleic acids and other biological materials.

Implementation Method 1

a base layer that is provided on a side opposite to the magnetic metal particle of the inorganic oxide layer and contains a metal element serving as a gold ion reducing agent or a catalyst for a gold ion reduction reaction

Methodology Applied
Scientific EffectGold ion reduction: Redox Reactions

Implementation Method 2

an immobilization layer that is bound to a surface of the gold layer and contains a self-assembling molecule containing an aptamer

Methodology Applied
Scientific EffectSelf-assembly: Self-Assembly

Implementation Method 3

the immobilization layer presents an aptamer. The aptamer may have an ability to specifically bind to a target

Methodology Applied
Scientific EffectAptamer binding: Adsorption

Data Source

PatentUS20250271338A1Biological Material Extraction Magnetic Bead
Publication Date: 2025.08.28 SEIKO EPSON CORP
  • US20250271338A1 patent drawing
  • US20250271338A1 patent drawing
  • US20250271338A1 patent drawing

AI summary

A biological material extraction magnetic bead includes: a magnetic metal particle; an inorganic oxide layer that covers a surface of the magnetic metal particle and contains an inorganic oxide; a base layer that is provided on a side opposite to the magnetic metal particle of the inorganic oxide layer and contains a metal element serving as a gold ion reducing agent or a catalyst for a gold ion reduction reaction; a gold layer that covers a surface of the base layer and contains gold; and an immobilization layer that is bound to a surface of the gold layer and contains a self-assembling molecule containing an aptamer.