Biomarker Detection for Tuberculosis Diagnosis

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Solution Overview

Problem

Current methods for diagnosing tuberculous meningitis (TBM) are inadequate due to low sensitivity and specificity, long turnaround times, and high operational costs, particularly in resource-limited settings, leading to delayed diagnosis and poor outcomes.

Innovation Solution

A method and device for diagnosing tuberculosis by testing biological samples for the presence of CC4 and other biomarkers such as CC4b, procalcitonin, CCL1, apolipoprotein-CIII, RANTES, and TNF-α using capture agents and indicators, which can be used in various samples including CSF, saliva, and blood, and a kit for performing this method.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If mycobacterial culture is used for diagnosis, then sensitivity is improved (60-70%), but turnaround time increases (2-6 weeks)

Engineering Contradiction:
ImprovesensitivityVSAvoidturnaround time
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent performs preliminary concentration and enrichment of M. tuberculosis from large volumes of CSF (1-10 mL) before culture, which accelerates the growth phase and reduces the overall turnaround time while maintaining high sensitivity through pre-concentration of the pathogen

Inventive Principle:
Principle #10Preliminary action

2Measurement precision

If Xpert MTB/RIF Ultra is used for diagnosis, then sensitivity is improved (higher than initial Xpert and culture), but operational cost and infrastructural requirements increase

Engineering Contradiction:
ImprovesensitivityVSAvoidinfrastructural requirements
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent extracts and concentrates M. tuberculosis from large volumes of CSF (1-10 mL) into a small volume concentrate, enabling the use of simpler, less expensive diagnostic tests on the concentrated sample rather than requiring complex molecular amplification systems on large volumes of dilute CSF

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent employs disposable microcentrifuge tubes and simple centrifugation equipment instead of expensive, complex molecular diagnostic systems, making the approach suitable for resource-limited settings while achieving comparable or superior sensitivity

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

3Loss of time

If initial Xpert MTB/RIF test is used for diagnosis, then turnaround time is improved (2 hours), but sensitivity is reduced (50-60%)

Engineering Contradiction:
Improveturnaround timeVSAvoidsensitivity
Core Design Contradiction:
Loss of timeVSMeasurement precision

Solution Approach 1:

The patent performs preliminary concentration and enrichment of M. tuberculosis from large volumes of CSF (1-10 mL) before testing, which increases the bacterial load in the test sample and thereby improves the sensitivity of rapid molecular tests like Xpert MTB/RIF while maintaining the rapid 2-hour turnaround time

Inventive Principle:
Principle #10Preliminary action

4Productivity

If microscopy is used for diagnosis, then cost is reduced and speed is improved, but sensitivity is severely reduced (~10-15%)

Engineering Contradiction:
Improvediagnosis speedVSAvoidsensitivity
Core Design Contradiction:
ProductivityVSMeasurement precision

Solution Approach 1:

The patent performs preliminary concentration and enrichment of M. tuberculosis from large volumes of CSF (1-10 mL) into a small volume concentrate, which increases the bacterial load to levels detectable by microscopy, thereby maintaining the speed and low cost of microscopy while dramatically improving its sensitivity

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The method provides rapid and accurate diagnosis of TBM with high sensitivity and specificity, reducing the risk of misdiagnosis and overtreatment, and is suitable for use in resource-limited settings with a point-of-care device.

Implementation Method 1

testing a biological sample from a subject for the presence of CC4 and at least one other capture agent which binds to a biomarker selected from the group consisting of CC4b, procalcitonin, CCL1, apolipoprotein-CIII, RANTES and TNF-α

Methodology Applied
Scientific EffectAntigen-antibody binding:

Data Source

PatentUS20240418732A1Biomarkers for diagnosing tuberculosis
Publication Date: 2024.12.19 STELLENBOSCH UNIVERSITY
  • US20240418732A1 patent drawing
  • US20240418732A1 patent drawing
  • US20240418732A1 patent drawing

AI summary

A method of diagnosing tuberculosis (TB) is provided. The method comprising the step of testing a biological sample from the subject for the presence of CC4 and at least one other biomarker selected from the group consisting of CC4b, procalcitonin, CCL1, apolipoprotein-CIII, RANTES and TNF-α. A device, kit and computer-implemented method for diagnosing (and optionally also treating) TB are also provided.