Fluorescence Biosensor Light Guides for Crosstalk-Resistant Detection

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Solution Overview

Problem

Conventional fluorescent-detection protocols face challenges such as high costs and large benchtop footprints due to the need for complex optical systems. Additionally, solid-state imaging systems struggle with distinguishing fluorescent emissions from excitation light and managing unwanted light emissions from adjacent analytes, leading to issues like crosstalk.

Innovation Solution

A biosensor system is developed, comprising a flow cell and a detection device with a device base, sensor array of light sensors, and guide array of light guides. The light guides have input regions for receiving excitation light and emissions, with a filter material to filter out excitation light and allow emissions to reach the sensors. A shield layer with apertures is used to block excitation light and reduce crosstalk between adjacent light sensors.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional optical systems are used for fluorescent detection, then detection capability is achieved, but device complexity and cost increase

Engineering Contradiction:
Improvedetection capabilityVSAvoidoptical system complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent combines the flow cell with the detection device to form an integrated unit. The flow cell is coupled directly to the device base, merging sample preparation and detection functions into a single integrated system, thereby reducing overall device complexity while maintaining detection capability

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

Light guides are introduced as intermediary elements between the flow channel and light sensors. These light guides channel and direct light emissions from the flow channel to specific sensors, simplifying the optical path and reducing the need for complex optical components like lenses and mirrors

Inventive Principle:
Principle #24Intermediary (Mediator)

2Area of stationary object

If solid-state imaging systems are used, then device footprint is reduced, but ability to distinguish fluorescent emissions from excitation light deteriorates

Engineering Contradiction:
Improvebenchtop footprintVSAvoidemission detection accuracy
Core Design Contradiction:
Area of stationary objectVSMeasurement precision

Solution Approach 1:

The patent extracts and removes the excitation light from the detection path using filter materials. These filters are positioned within the light guides to selectively block excitation light wavelengths while allowing fluorescent emission wavelengths to pass through to the sensors, thereby improving emission detection accuracy

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent adds a spectral dimension to the detection by incorporating wavelength-selective filtering. This allows the system to distinguish between excitation and emission light based on their different wavelengths, enabling accurate emission detection with compact solid-state sensors

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

3Productivity

If analyte density on solid-state imager is increased, then detection throughput is improved, but crosstalk between adjacent analytes increases

Engineering Contradiction:
Improvedetection throughputVSAvoidsignal separation accuracy
Core Design Contradiction:
ProductivityVSMeasurement precision

Solution Approach 1:

Shield layers with apertures are positioned between the flow channel and device base to block stray light and crosstalk signals. The shield layer extends between adjacent apertures to prevent light emissions from adjacent analytes from reaching each other's sensors, maintaining signal separation accuracy even at high analyte densities

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent applies local optical filtering and shielding at each sensor location. Filter materials are positioned within individual light guides, and shield layers are configured with specific aperture patterns to provide localized protection against crosstalk, allowing high-density analyte arrays to be detected with minimal interference

Inventive Principle:
Principle #3Local quality

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The biosensor system effectively reduces the complexity and cost of detection systems by integrating the detection device with the flow cell, improving the ability to distinguish fluorescent emissions from excitation light, and minimizing crosstalk, thereby enhancing the accuracy and efficiency of biological or chemical analysis.

Implementation Method 1

The light guides have a filter material that is configured to filter the excitation light and permit the light emissions to propagate toward the corresponding light sensors

Methodology Applied
Scientific EffectOptical filtering: Filter (optical)

Implementation Method 2

The shield layer extends between adjacent apertures and is configured to block the excitation light and the light emissions incident on the shield layer between the adjacent apertures

Methodology Applied
Scientific EffectLight blocking: Absorption (EM radiation)

Implementation Method 3

The light guides extend into the device base from the input regions toward corresponding light sensors

Methodology Applied
Scientific EffectLight guidance: Waveguide (optics)

Implementation Method 4

The flow cell and the detection device form a flow channel that is configured to have biological or chemical substances therein that generate light emissions in response to an excitation light

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentUS20250044230A1Biosensors for biological or chemical analysis and methods of manufacturing the same
Publication Date: 2025.02.06 ILLUMINA INC
  • US20250044230A1 patent drawing
  • US20250044230A1 patent drawing
  • US20250044230A1 patent drawing

AI summary

Biosensor including a device base having a sensor array of light sensors and a guide array of light guides. The light guides have input regions that are configured to receive excitation light and light emissions generated by biological or chemical substances. The light guides extend into the device base toward corresponding light sensors and have a filter material. The device base includes device circuitry electrically coupled to the light sensors and configured to transmit data signals. A passivation layer extends over the device base and forms an array of reaction recesses above the light guides. The biosensor also includes peripheral crosstalk shields that at least partially surround corresponding light guides of the guide array to reduce optical crosstalk between adjacent light sensors.