Biosensor Nucleotide Detection Surface Design

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Solution Overview

Problem

Conventional affinity-based biosensors often result in false positives and false negatives due to nonspecific interactions between nucleotides and gold surfaces, leading to incomplete hybridization and reduced sensitivity in nucleotide detection.

Innovation Solution

A biosensor structure with a nucleotide-attracting surface is designed, featuring a conductive layer with an analyte-affinity layer of gold, surrounded by a dielectric layer, where the dimensions of the surface are tailored to accommodate only a single nucleotide pair, reducing nonspecific interactions and enhancing hybridization efficiency.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If a gold surface is used for nucleotide detection, then analyte attraction capability is improved, but false detection increases due to nonspecific interactions

Engineering Contradiction:
Improveanalyte attraction capabilityVSAvoidfalse detection rate
Core Design Contradiction:
ReliabilityVSMeasurement precision

Solution Approach 1:

The patent applies local quality by creating distinct regions on the sensor surface: a hydrophobic region that specifically attracts nucleotides and a hydrophilic region that reduces nonspecific interactions. This spatial differentiation of surface properties allows the gold surface to maintain its analyte attraction capability while minimizing false detections through localized functional zones

Inventive Principle:
Principle #3Local quality

2Productivity

If a large surface area is used for detection, then detection capacity is improved, but nonsspecific interactions increase leading to false positives

Engineering Contradiction:
Improvedetection capacityVSAvoidnonspecific interactions
Core Design Contradiction:
ProductivityVSObject-generated harmful factors

Solution Approach 1:

The patent divides the detection surface into functionally distinct regions with different wetting properties. The hydrophobic region provides the active detection area for nucleotide binding, while the hydrophilic region acts as a control area that minimizes nonspecific interactions. This local differentiation allows the system to maintain high detection capacity through the hydrophobic region while the hydrophilic region suppresses false positives

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent introduces a hydrophobic/hydrophilic interface as an intermediary system between the gold surface and the nucleotide analytes. This interface mediates the interaction by providing a hydrophobic pathway for specific nucleotide binding while the hydrophilic portion acts as a barrier against nonspecific adsorption, thus reducing false positives without compromising detection capacity

Inventive Principle:
Principle #24Intermediary (Mediator)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach reduces false detection readings by limiting interactions to specific nucleotide pairs, improving hybridization efficiency and accuracy in nucleotide detection.

Implementation Method 1

Selective interactions between an analyte and a surface of a biosensor may be exploited to attract a particular analyte to the surface of the biosensor

Methodology Applied
Scientific EffectAffinity-based interaction: Adsorption

Implementation Method 2

forming a first photoresist layer on an upper surface of a substrate. The method may include removing a portion of the first photoresist layer along a length of the substrate

Methodology Applied
Scientific EffectPhotolithography: Photopolymerisation

Data Source

PatentUS10712308B2Biosensor for electrical detection of a nucleotide sequence
Publication Date: 2020.07.14 INTERNATIONAL BUSINESS MACHINE CORPORATION
  • US10712308B2 patent drawing
  • US10712308B2 patent drawing
  • US10712308B2 patent drawing

AI summary

The present invention relates generally to the field of microelectronics, and more particularly to a structure and method of forming a biosensor having a nucleotide attracting surface formed to reduce false detection of nucleotides and enabling electrical detection of nucleotides. The biosensor may include an analyte-affinity layer on an upper surface of a substrate. A conductive layer may extend a length of the substrate below and in contact with the analyte-affinity layer. The conductive layer may be electrically connected to one or more transistors. The analyte-affinity layer may have dimensions tailored for a target analyte. A distance between a first analyte-affinity layer and a second analyte-affinity layer may range from approximately 50% of a length of a target analyte to approximately 300% of a length of a target analyte. The analyte-affinity layer may have an upper surface with a diameter ranging from approximately 3 nm to approximately 20 nm.