BRD9 Degrader Compounds for BAF-Related Disorder Treatment

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Solution Overview

Problem

Current treatments for BAF complex-related disorders, such as cancer and infections, lack effective agents that can reduce the levels and/or activity of BRD9, a component of the BAF complex, which is upregulated in multiple cancer cell lines and involved in cellular antiviral activities.

Innovation Solution

Development of compounds with a BRD9 binding moiety and a degradation moiety linked by various linkers to target and degrade BRD9, thereby reducing its levels and activity in cells.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional treatments are used for BAF complex-related disorders, then current standard care is maintained, but effective reduction of BRD9 levels and activity is not achieved

Engineering Contradiction:
Improveeffectiveness of treatmentVSAvoidBRD9 levels and activity
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The patent extracts and targets BRD9 specifically from the BAF complex through degrader compounds that selectively bind to and degrade BRD9, separating its harmful effects from the rest of the complex while maintaining potential beneficial functions of other BAF components

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the parameter of BRD9 levels and activity by introducing compounds that modify BRD9 stability and degradation rates, thereby reducing BRD9 protein levels and associated harmful activities in cancer and infection models

Inventive Principle:
Principle #35Parameter changes

2Reliability

If BRD9 is depleted in cells, then treatment of BAF-related disorders is improved, but cellular antiviral activities may be affected

Engineering Contradiction:
Improvetreatment efficacyVSAvoidcellular antiviral activities
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies local quality by selectively targeting BRD9 for degradation while attempting to preserve other components of the BAF complex and their antiviral functions, creating a localized effect that reduces BRD9-driven pathology without globally impacting cellular antiviral capabilities

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent incorporates feedback mechanisms through monitoring of BRD9 levels, BAF complex composition, and antiviral activity to adjust degradation intensity and duration, preventing excessive depletion that would compromise protective antiviral functions

Inventive Principle:
Principle #23Feedback

Data Source

PatentUS12351579B2Compounds and uses thereof
Publication Date: 2025.07.08 FOGHORN THERAPEUTICS INC
  • US12351579B2 patent drawing
  • US12351579B2 patent drawing
  • US12351579B2 patent drawing

AI summary

The present invention relates to compositions and methods for the treatment of BAF-related disorders, such as cancers and viral infections.