BTK Mutation Detection for Ibrutinib Resistance and Therapy Selection

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Solution Overview

Problem

Existing treatments with BTK inhibitors like Ibrutinib face resistance due to mutations in the kinase domain of Bruton's Tyrosine Kinase (BTK), particularly at position C481, leading to leukemia progression and Richter transformation, with unclear mechanisms of cancer relapse and resistance.

Innovation Solution

Identification and characterization of mutations, such as BTKT316A in the SH2 domain, which confer resistance to BTK inhibitors, allowing for methods to determine resistance, optimize therapy, and select appropriate inhibitors, including second-generation BTK inhibitors for treatment.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If BTK inhibitors like Ibrutinib are used to treat B-cell malignancies, then response rates are improved, but resistance develops due to BTK mutations

Engineering Contradiction:
Improvetreatment efficacyVSAvoiddrug resistance
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent applies parameter changes by developing second-generation BTK inhibitors with modified chemical structures and binding characteristics that can effectively inhibit mutant BTK forms (such as C481S, C481Y, C481A mutations) that resist first-generation inhibitors like ibrutinib. This involves altering the inhibitor's molecular parameters to maintain binding affinity while overcoming mutation-induced resistance.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent employs dynamics by creating a sequential treatment strategy where patients can transition from first-generation to second-generation BTK inhibitors based on resistance development. This dynamic approach allows the treatment regimen to adapt over time, switching therapeutic agents in response to observed resistance patterns while maintaining continuous targeted inhibition of BTK signaling.

Inventive Principle:
Principle #15Dynamics

2Stability of the object's composition

If BTK inhibitors are administered, then cancer progression is initially controlled, but leukemia progression and Richter transformation occur due to resistance

Engineering Contradiction:
Improvedisease controlVSAvoidlong-term treatment success
Core Design Contradiction:
Stability of the object's compositionVSReliability

Solution Approach 1:

The patent applies preliminary action by implementing resistance monitoring programs that detect BTK mutation development before clinical progression occurs. Through regular genetic testing of patient samples, the system can identify emerging resistance mutations (such as in the kinase domain) and pre-emptively switch to appropriate second-generation inhibitors, preventing disease progression and Richter transformation before they manifest clinically.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent employs feedback mechanisms by using patient response data and genetic profiling to continuously adjust treatment strategies. When resistance is detected through monitoring of BTK mutation status or disease progression markers, the system provides feedback to switch from first-generation to second-generation inhibitors, creating a closed-loop treatment approach that adapts to individual patient needs and maintains long-term disease control.

Inventive Principle:
Principle #23Feedback

3Object-affected harmful factors

If treatment is discontinued due to resistance, then further progression is prevented, but patient outcomes deteriorate without effective therapy

Engineering Contradiction:
Improvedisease progression preventionVSAvoidpatient survival
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent applies the intermediary principle by introducing second-generation BTK inhibitors as mediator agents that can effectively target mutant BTK forms resistant to first-generation inhibitors. These second-generation inhibitors serve as intermediate therapeutic solutions that bridge the gap when resistance develops, allowing continued effective treatment rather than complete therapy discontinuation, thereby maintaining patient outcomes while preventing disease progression.

Inventive Principle:
Principle #24Intermediary (Mediator)

Data Source

PatentUS12435379B2BTK mutation and ibrutinib resistance
Publication Date: 2025.10.07 UNIVERSITY OF CHICAGO
  • US12435379B2 patent drawing
  • US12435379B2 patent drawing
  • US12435379B2 patent drawing

AI summary

Provided herein are mutations in Bruton's Tyrosine Kinase (BTK) that confer resistance to treatment with a BTK inhibitors, such as Ibrutinib, and compositions and methods for the treatment, diagnosis, and characterization of BTK-inhibitor-resistant cancers.