CAR T Cell Phosphorylation Site Mutations for Toxicity Control

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Solution Overview

Problem

Current chimeric antigen receptor (CAR) T cell therapies for cancer face challenges with poor persistence and excessive activation leading to relapses and toxicities, despite improved efficacy with co-stimulatory domains, indicating a need to modulate CAR expression and activity.

Innovation Solution

Development of CAR polypeptides with mutated CD28 cytoplasmic domains, specifically altering phosphorylation sites such as Y206 and Y218, to attenuate or enhance CAR activity and expression, combined with phosphomimetic or non-phosphorylatable amino acid substitutions, to optimize T cell function and reduce adverse effects.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If co-stimulatory domains (CD28) are added to CARs to improve tumor killing efficacy, then anti-tumor activity is enhanced, but excessive T cell activation occurs leading to toxicities

Engineering Contradiction:
Improveanti-tumor activityVSAvoidT cell activation toxicity
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies parameter changes by mutating specific phosphorylation sites (Y206 and/or Y218) in the CD28 cytoplasmic domain of the CAR. These mutations alter the biochemical parameters of the co-stimulatory domain, modifying how it transmits activation signals to the T cell. This allows tuning the activation threshold and signal strength to achieve effective anti-tumor activity while reducing excessive activation and associated toxicities.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent applies local quality by making specific localized modifications to the CD28 domain rather than altering the entire CAR structure. The mutations are confined to specific phosphorylation sites (Y206 and/or Y218) within the cytoplasmic tail of CD28, leaving other functional regions intact. This localized modification approach preserves essential co-stimulatory functions while selectively modulating activation signaling to reduce toxicities.

Inventive Principle:
Principle #3Local quality

2Reliability

If co-stimulatory domains (CD28) are added to CARs to improve tumor killing efficacy, then tumor killing is enhanced, but T cell persistence is reduced

Engineering Contradiction:
Improvetumor killing efficacyVSAvoidT cell persistence
Core Design Contradiction:
ReliabilityVSDuration of action of stationary object

Solution Approach 1:

The patent uses parameter changes by mutating phosphorylation sites in the CD28 domain to alter the temporal dynamics of T cell activation. The mutations modify signal duration and intensity, creating a more sustained but controlled activation pattern that promotes T cell persistence in the tumor microenvironment while maintaining effective tumor killing capability.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent applies dynamics by creating CARs with mutated CD28 domains that exhibit dynamic signal transmission properties. The phosphorylation site mutations allow the co-stimulatory domain to adapt its signaling behavior, providing sustained activation during tumor encounter while preventing excessive activation that would lead to T cell exhaustion or death, thereby improving persistence.

Inventive Principle:
Principle #15Dynamics

3Object-affected harmful factors

If phosphorylation sites (Y206, Y218) in CD28 are mutated to attenuate CAR activity, then toxicities are reduced, but CAR expression and activity decrease

Engineering Contradiction:
ImprovetoxicityVSAvoidCAR activity
Core Design Contradiction:
Object-affected harmful factorsVSReliability

Solution Approach 1:

The patent applies parameter changes by selectively mutating specific phosphorylation sites (Y206 and/or Y218) rather than eliminating co-stimulatory signaling entirely. This partial modification approach adjusts the activation threshold and signal strength parameters, reducing toxicities associated with excessive activation while preserving sufficient CAR activity for effective tumor targeting and killing.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent applies partial action by mutating only specific phosphorylation sites within the CD28 domain rather than disabling the entire co-stimulatory function. This partial modification strategy reduces harmful over-activation while maintaining enough co-stimulatory signaling to support effective CAR T cell function, achieving a balance between reducing toxicity and preserving activity.

Inventive Principle:
Principle #16Partial or excessive action

Data Source

PatentUS12077598B2Chimeric antigen receptors with mutated CD28 phosphorylation sites
Publication Date: 2024.09.03 H LEE MOFFITT CANCER CENTER & RESEARCH INSTITUTE INC
  • US12077598B2 patent drawing
  • US12077598B2 patent drawing
  • US12077598B2 patent drawing

AI summary

Disclosed herein are chimeric antigen receptor (CAR) polypeptides, which can be used with adoptive cell transfer to target and kill cancers, that comprise a costimulatory signaling region having a mutated form of a cytoplasmic domain of CD28 with altered phosphorylation at Y206 and/or Y218. Also disclosed are immune effector cells, such as T cells or Natural Killer (NK) cells, that are engineered to express these CARs. Therefore, also disclosed are methods of providing an antitumor immunity in a subject with a tumor associated antigen-expressing cancer that involves adoptive transfer of the disclosed immune effector cells engineered to express the disclosed CARs.