CD3 Zeta-Deficient CAR Fragment Integration for Allogeneic Therapy

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Solution Overview

Problem

Current CAR-T cell therapy for cancer faces challenges such as complexity in production, high costs, severe side effects, inefficient gene transfer, and risk of graft-versus-host disease due to the use of viral vectors and large gene constructs, particularly in allogenic cell products.

Innovation Solution

A nucleic acid construct integrating a CD3 zeta-deficient chimeric antigen receptor (CAR) fragment into the endogenous CD3 zeta/CD247 gene, allowing for intrinsic regulation and expression, reducing TCR complex formation, and enabling efficient manufacturing of allogeneic CAR-expressing cells without viral vectors.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If viral vectors and large gene constructs are used for CAR-T cell therapy, then CAR expression can be achieved, but production complexity and costs increase

Engineering Contradiction:
ImproveCAR expressionVSAvoidproduction complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The invention divides the CAR construct into two parts: a coding sequence region that is small and easy to transfer, and a regulatory region that is integrated into the endogenous CD3 zeta gene promoter. This segmentation allows the coding sequence to be efficiently transferred without viral vectors while the regulatory control is provided by the integrated promoter, reducing production complexity.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention merges the CAR coding sequence with the endogenous CD3 zeta gene promoter by integrating the construct at the CD3 zeta locus. This combination allows the CAR expression to be controlled by the native promoter, eliminating the need for separate viral vector-based regulatory elements and simplifying the overall construct.

Inventive Principle:
Principle #5Merging (Combining)

2Reliability

If viral vectors are used for gene transfer, then CAR expression can be achieved, but side effects like cytokine storms and graft-versus-host disease increase

Engineering Contradiction:
ImproveCAR expressionVSAvoidside effects
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The invention extracts the CAR coding sequence from the viral vector-based system and integrates it directly into the endogenous CD3 zeta gene. This extraction eliminates the harmful effects of viral vectors (cytokine storms, graft-versus-host disease) while maintaining CAR expression through the integrated construct at the CD3 zeta locus.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The endogenous CD3 zeta promoter provides self-regulated expression of the CAR construct. The promoter naturally controls when and where the CAR is expressed, eliminating the need for external viral vector-based regulatory mechanisms that cause harmful side effects. The system serves itself through the native regulatory elements.

Inventive Principle:
Principle #25Self-service

3Reliability

If large gene constructs are used for CAR-T cell therapy, then CAR expression can be achieved, but gene transfer efficiency decreases

Engineering Contradiction:
ImproveCAR expressionVSAvoidgene transfer efficiency
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The invention segments the gene construct into a small coding sequence region and a regulatory region. The coding sequence is optimized for efficient transfer and integration, while the regulatory control is provided by the integrated promoter. This segmentation dramatically improves gene transfer efficiency compared to using large complete CAR constructs.

Inventive Principle:
Principle #1Segmentation

4Reliability

If allogeneic CAR-T cells are produced with TCR complex formation, then CAR expression can be achieved, but graft-versus-host disease risk increases

Engineering Contradiction:
ImproveCAR expressionVSAvoidgraft-versus-host disease
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The invention extracts and eliminates the TCR complex formation by integrating the CAR construct at the CD3 zeta locus, which is a component of the TCR complex. This extraction prevents the formation of functional TCRs on the cell surface, thereby eliminating the risk of graft-versus-host disease in allogeneic CAR-T cell therapy while maintaining CAR expression.

Inventive Principle:
Principle #2Taking out (Extraction)

Data Source

PatentUS20230406903A1Reprogramming immune cells by targeted integration of zeta-deficient chimeric antigen receptor transgenes
Publication Date: 2023.12.21 CHARITE UNIVS MEDIZIN BERLIN
  • US20230406903A1 patent drawing
  • US20230406903A1 patent drawing
  • US20230406903A1 patent drawing

AI summary

A nucleic acid construct for targeting and integrating a CD3 zeta-deficient chimeric antigen receptor (CAR) fragment into an endogenous CD3 zeta/CD247 gene of a host genome. Also disclosed is a genetically modified human cell expressing an exogenous nucleic acid sequence encoding a CD3 zeta deficient CAR fragment, integrated in-frame into the endogenous CD3 zeta/CD247 gene for gene fusion, to form a functional CAR including an exogenous CAR fragment fused with an endogenous CD3 zeta domain.