Cell Production Quality Control With Label-Free Fluorescence Prediction

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Solution Overview

Problem

Existing methods for assessing cell quality during production processes are invasive, requiring fluorescence labeling and disrupting the process, which is not suitable for therapeutic applications.

Innovation Solution

A method using non-invasive 3D microscopy and neural networks to generate predicted fluorescence images of cells, allowing real-time quality assessment without fluorescence labeling, utilizing a bioreactor, microscope, and computing device to identify quality attributes.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If fluorescence labeling is used to assess cell quality, then measurement precision is improved, but the cell production process is disrupted and reliability deteriorates

Engineering Contradiction:
Improvecell quality assessment accuracyVSAvoidprocess integrity
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent creates a predicted fluorescence image that copies the information content of a true fluorescence image without using actual fluorescence labeling. The neural network model generates a synthetic fluorescence image from transmitted light microscopy images, allowing quality assessment while maintaining process integrity. This copying approach eliminates the need for invasive fluorescence tags while preserving measurement capability.

Inventive Principle:
Principle #26Copying

Solution Approach 2:

The patent introduces transmitted light microscopy images as an intermediary that bridges the gap between non-invasive imaging and fluorescence-based quality assessment. The neural network acts as a mediator that translates transmitted light images into predicted fluorescence images, enabling indirect but accurate quality measurement without direct fluorescence labeling.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Measurement precision

If fluorescence labeling is applied to measure cell quality attributes, then measurement precision is improved, but device complexity and ease of operation worsen due to additional labeling steps

Engineering Contradiction:
Improvequality attribute detection accuracyVSAvoidimaging process complexity
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The method creates a predicted fluorescence image that replicates the informational content of actual fluorescence images without requiring fluorescence labeling equipment or procedures. The neural network model generates synthetic fluorescence signals from standard transmitted light microscopy data, eliminating the need for complex fluorescence imaging systems while maintaining measurement precision.

Inventive Principle:
Principle #26Copying

Solution Approach 2:

The patent extracts the essential quality information from transmitted light images that would otherwise require fluorescence labeling. By using the neural network to predict fluorescence signals from non-invasive images, the method removes the need for fluorescence labeling steps and associated complex equipment while preserving the ability to measure quality attributes accurately.

Inventive Principle:
Principle #2Taking out (Extraction)

3Measurement precision

If traditional quality assessment methods are used, then measurement precision is improved, but productivity deteriorates due to time-consuming invasive procedures

Engineering Contradiction:
Improvecell quality measurement accuracyVSAvoidquality assessment speed
Core Design Contradiction:
Measurement precisionVSProductivity

Solution Approach 1:

The patent performs preliminary action by training the neural network model in advance using paired fluorescence and transmitted light images. Once trained, the model can rapidly generate predicted fluorescence images from new transmitted light images without requiring actual fluorescence labeling or time-consuming image acquisition procedures, enabling fast quality assessment during production.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The method creates predicted fluorescence images that copy the essential quality information from transmitted light images through neural network processing. This copying approach eliminates the need for slow, sequential fluorescence imaging procedures while maintaining measurement accuracy, thereby significantly improving assessment speed and productivity.

Inventive Principle:
Principle #26Copying

Data Source

PatentUS12399100B2Systems, devices, and methods for quality control of cell production using predictive tagging
Publication Date: 2025.08.26 ALLEN INSTITUTE
  • US12399100B2 patent drawing
  • US12399100B2 patent drawing
  • US12399100B2 patent drawing

AI summary

The present invention provides various methods for easily assessing cell quality of a cell production process, suitably using non-invasive visual methods and neural networks for generating predictive fluorescence images of cells to assess quality attributes. Also provided are systems and methods for carrying out such processes.