3D Ceramic Microorganism Detection with Enzymatic Markers

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

Current methods for detecting and identifying bacteria and fungi are slow, require cumbersome sample preparation, and often fail to detect microorganisms at low concentrations or in complex samples, as they rely on adhesion to nanostructures and require additional steps like centrifugation, which can expose samples to contamination and are not suitable for solid or gaseous samples.

Innovation Solution

A three-dimensional structure arrangement using natural or artificial clays and ceramics with specific nutritional compounds and enzymatic markers that accelerate microbial growth, allowing for simultaneous detection, recovery, and identification of various bacteria and fungi within 60-90 minutes, regardless of concentration or sample type, without the need for adhesion or additional steps like centrifugation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If conventional culture methods are used for detecting and identifying microorganisms, then identification can be performed, but the sample incubation period is extended (at least 18 to 24 hours) and cumbersome manipulation is required

Engineering Contradiction:
Improvemicroorganism identification accuracyVSAvoidincubation period
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent changes the physical-chemical parameters of the culture medium by incorporating specific chromogenic substrates (e.g., MUG for beta-glucuronidase, X-GAL for beta-galactosidase) and fluorogenic substrates that undergo rapid color or fluorescence changes upon enzymatic cleavage. This allows microorganism identification within minutes rather than hours, dramatically reducing the incubation period while maintaining identification accuracy through specific enzymatic reactions.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent extracts and isolates specific enzymatic activities (beta-glucuronidase, beta-galactosidase, phosphatase, etc.) as detection targets. By using substrates that specifically react with these enzymes to produce detectable signals, the method enables rapid identification without requiring full cultural growth, thus reducing incubation time while preserving diagnostic precision.

Inventive Principle:
Principle #2Taking out (Extraction)

2Measurement precision

If adhesion to nanostructures is used for microorganism concentration, then detection sensitivity is improved, but not all microorganisms adhere to nanostructures and additional steps like centrifugation are required which expose samples to contamination

Engineering Contradiction:
Improvedetection sensitivityVSAvoidsample preparation steps
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent employs a universal culture medium formulation that supports the growth and enzymatic activity of diverse microorganism types (bacteria, yeasts, fungi) without requiring specific adhesion mechanisms. The medium contains broad-spectrum chromogenic and fluorogenic substrates that react with enzymes from various microbial groups, enabling simultaneous detection of multiple microorganism types in a single step without centrifugation or adhesion requirements.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The culture medium itself performs the concentration and detection functions through its chemical composition. The chromogenic and fluorogenic substrates automatically react with microbial enzymes present in the sample, generating detectable signals without requiring external concentration steps. The medium self-differentiates and identifies microorganisms based on their enzymatic profiles, eliminating the need for complex sample preparation equipment.

Inventive Principle:
Principle #25Self-service

3Measurement precision

If monoclonal antibodies are used for detection, then sensitivity is improved, but they are very sensitive to temperatures and have a very short service life

Engineering Contradiction:
Improvedetection sensitivityVSAvoidreagent stability
Core Design Contradiction:
Measurement precisionVSReliability

Solution Approach 1:

The patent replaces fragile monoclonal antibodies with stable chromogenic and fluorogenic substrate systems that do not require cold chain storage. These chemical substrates (e.g., MUG, X-GAL, phenolphthalein) are environmentally stable, have long shelf lives at room temperature, and do not denature with temperature fluctuations. The detection system uses inexpensive, disposable culture media containing these substrates, eliminating the need for expensive, temperature-sensitive biological reagents.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Solution Approach 2:

The patent substitutes the biological recognition system (monoclonal antibodies requiring precise temperature control) with a chemical recognition system (chromogenic and fluorogenic substrates). The chemical substrates undergo irreversible color or fluorescence changes upon enzymatic cleavage, providing stable, temperature-insensitive detection that does not rely on the conformational integrity of protein-based antibodies.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

4Measurement precision

If DNA or RNA fragments are used for identification, then specificity is improved, but additional equipment is required that may be unaffordable for small labs

Engineering Contradiction:
Improveidentification specificityVSAvoidequipment requirements
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent replaces expensive molecular biology equipment (PCR machines, sequencers, electrophoresis systems) with simple, disposable culture media containing chromogenic and fluorogenic substrates. The detection system uses basic visual observation or simple fluorescence readers that can be found in most laboratories, eliminating the need for expensive specialized equipment while maintaining identification specificity through enzyme-substrate reactions.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Solution Approach 2:

The patent substitutes complex molecular biology instrumentation with simple chemical reaction-based detection. Instead of requiring DNA extraction, amplification, and sequencing equipment, the method uses direct enzymatic reactions with chromogenic substrates in the culture medium, producing visible color changes or fluorescence that can be detected with the naked eye or simple optical devices.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

5Measurement precision

If filter-like devices with hydroxyapatite structure are used for microorganism concentration, then liquid sample detection is improved, but the method only applies to liquid samples and requires further equipment

Engineering Contradiction:
Improveliquid sample detection accuracyVSAvoidsample type applicability
Core Design Contradiction:
Measurement precisionVSAdaptability or versatility

Solution Approach 1:

The patent develops a universal culture medium formulation that can process multiple sample types (liquids, solids, gases) without requiring sample-specific concentration devices. The medium contains chromogenic and fluorogenic substrates that detect microbial enzymes across all sample types, and the method includes appropriate controls and incubation conditions for each sample type, enabling a single system to handle diverse sample matrices.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent segments the detection system into modular components: (1) sample preparation steps specific to each sample type, (2) universal culture medium with chromogenic/fluorogenic substrates, and (3) detection methods. This segmentation allows the core detection mechanism to remain simple and equipment-free while adapting only the necessary sample input steps for different sample types, eliminating the need for complex concentration devices.

Inventive Principle:
Principle #1Segmentation

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This method enables rapid and accurate detection and identification of a wide range of microorganisms, including those at low concentrations, in various sample types, including solids and gases, with high sensitivity and specificity, using a simple and cost-effective process that does not require specialized equipment.

Implementation Method 1

The use of ceramic materials, including nanostructured ones, has been aimed mainly to concentrate microorganisms on samples for their further identification

Methodology Applied
Scientific EffectAdsorption: Adsorption

Implementation Method 2

enzymatic markers that accelerate microbial growth, allowing for simultaneous detection, recovery, and identification of various bacteria and fungi within 60-90 minutes

Methodology Applied
Scientific EffectEnzyme: Enzyme

Data Source

PatentEP2837690B1Method for simultaneous detection, recovery, identification and counting of microorganisms and three dimentioanl structure for the implementation of said method
Publication Date: 2017.09.13 CENT NACIONAL DE INVESTIGACIONES CIENTIFICAS (CINC)
  • EP2837690B1 patent drawing
  • EP2837690B1 patent drawing
  • EP2837690B1 patent drawing

AI summary

Method and devices for the simultaneous detection, recovery, identification and counting of a plurality of microorganisms consisting in providing mixtures of nutrients specially selected from those that curtail the lag phase of growth in bacteria and moulds and which, together with fluorescent enzymatic, chromogenic or bioluminescent markers and other nutrient components or growth inhibitors, are embedded in three-dimensional structures or natural or artificial clays or ceramics with cavities of different dimensions and forms and specific surface areas of between 2 x 103 and 6 x 108 m2/m3.