Chimeric Hydrogenase Oxygen Tolerance via EPSA Ratio

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Solution Overview

Problem

Current methods for producing hydrogen biologically, such as using photosynthetic algae, face challenges due to the short half-life of hydrogenases and their sensitivity to oxygen, which limits commercial viability and hydrogen production rates.

Innovation Solution

Development of chimeric hydrogenases with optimized electrostatic potential surface area ratios, created through directed evolution and gene shuffling techniques, to enhance hydrogen production rates and tolerance to oxygen, allowing for increased hydrogen production in algae like Chlamydomonas reinhardtii.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If wild type hydrogenase is used in photosynthetic algae, then the algae can produce hydrogen through photosynthesis, but the hydrogen production rate is limited due to short half-life and oxygen sensitivity

Engineering Contradiction:
Improvehydrogen production rateVSAvoidhydrogenase stability
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent applies parameter changes by modifying the electrostatic potential surface area (EPSA) ratio of the hydrogenase enzyme through directed evolution. Specifically, the invention selects hydrogenase variants with a positive to negative EPSA ratio between 1:1 and 10:1, which fundamentally alters the enzyme's electrostatic properties to reduce oxygen sensitivity and extend half-life, thereby resolving the contradiction between productivity and reliability

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent uses copying by creating chimeric hydrogenases that combine functional domains from different hydrogenase sources. The invention copies and recombines specific functional regions from bacterial hydrogenases (such as Clostridium species) with algal hydrogenase frameworks, generating hybrid enzymes that inherit the stability and oxygen tolerance of bacterial variants while maintaining photosynthetic hydrogen production capability

Inventive Principle:
Principle #26Copying

2Productivity

If hydrogenase is exposed to oxygen during photosynthesis, then the photosynthetic process continues normally, but the hydrogen production is inhibited due to oxygen sensitivity

Engineering Contradiction:
Improvehydrogen productionVSAvoidoxygen sensitivity
Core Design Contradiction:
ProductivityVSObject-affected harmful factors

Solution Approach 1:

The patent applies the blessing in disguise principle by converting the harmful effect of oxygen into a beneficial selection pressure. The invention deliberately exposes hydrogenase variants to oxygen during evolution, allowing only oxygen-tolerant variants to survive and reproduce. This transforms oxygen from a harmful inhibitor into a selective force that identifies and amplifies beneficial hydrogenase mutants with enhanced stability

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Solution Approach 2:

The patent changes the electrostatic potential parameters of the hydrogenase enzyme to reduce oxygen sensitivity. By selecting variants with specific positive to negative EPSA ratios (1:1 to 10:1), the invention modifies the enzyme's surface charge distribution, which fundamentally alters its interaction with oxygen and other inhibitors, allowing continuous operation during photosynthesis

Inventive Principle:
Principle #35Parameter changes

3Duration of action of stationary object

If hydrogenase half-life is extended through mutation, then hydrogen production sustainability improves, but the complexity of genetic modification increases

Engineering Contradiction:
Improvehydrogenase half-lifeVSAvoidgenetic modification complexity
Core Design Contradiction:
Duration of action of stationary objectVSDevice complexity

Solution Approach 1:

The patent simplifies genetic modification by using copying of functional domains from well-characterized bacterial hydrogenases. Instead of creating novel enzymes from scratch, the invention copies and recombines proven functional modules from Clostridium species hydrogenases with algal hosts, reducing the complexity of genetic engineering while achieving extended half-life

Inventive Principle:
Principle #26Copying

Solution Approach 2:

The patent uses measurable electrostatic potential parameters (EPSA ratio) as selection criteria to guide genetic modification. By focusing on variants with specific positive to negative charge ratios (1:1 to 10:1), the invention creates a quantifiable framework for identifying beneficial mutations, simplifying the complex process of directed evolution into a systematic parameter-based selection approach

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The modified hydrogenases demonstrate improved hydrogen production rates and oxygen tolerance, potentially enabling the commercial production of hydrogen from photosynthetic organisms, reducing greenhouse gas emissions and offering a sustainable energy source.

Implementation Method 1

Photosynthetic hydrogen production from the green alga chlamydomonas reinhardii

Methodology Applied
Scientific EffectPhotosynthesis: Photosynthesis

Implementation Method 2

The electrons are immediately energized by a photon (λ=680 nm) in Photosystem II and passed from one compound to another, all of which compose the electron transport chain

Methodology Applied
Scientific EffectElectron transport:

Implementation Method 3

Hydrogen is produced by enzymatically combining protons with electrons from the photosynthetic electron transport chain

Methodology Applied
Scientific EffectHydrogenase catalysis: Enzyme

Implementation Method 4

The electrons are immediately energized by a photon (λ=680 nm) in Photosystem II

Methodology Applied
Scientific EffectPhotoexcitation: Photoelectric Effect

Data Source

PatentUS8759058B2Photosynthetic hydrogen production from the green alga chlamydomonas reinhardii
Publication Date: 2014.06.24 H2OPE BIOFUELS LLC
  • US8759058B2 patent drawing
  • US8759058B2 patent drawing
  • US8759058B2 patent drawing

AI summary

The present invention relates generally to hydrogen production for use in fuel cells, foodstuffs and chemical production, and more particularly, to biologically and photosynthetically produced hydrogen. Specifically, disclosed is a method for producing bacteria and green alga that can produce hydrogen in quantities that exceed four hundred percent of the hydrogen produced by green alga in nature; thus, producing organisms which can serve as hydrogen generators for fuel cells, chemical production and numerous other applications.