Engineered CHO Cells Removing Endogenous Retrovirus Elements

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Solution Overview

Problem

Current mammalian cell lines used in recombinant protein manufacturing, such as CHO cells, contain remnants of infectious viral particles that pose safety concerns and require labor-intensive characterization, leading to regulatory challenges and potential risks in therapeutic protein production.

Innovation Solution

Engineered CHO cells with altered genomes that suppress or eliminate endogenous retrovirus elements, using CRISPR/Cas9 systems to introduce deletions, additions, or substitutions in ERV elements, thereby reducing the release of viral particles and enhancing safety profiles.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If CHO cells are used for therapeutic protein production, then stable host capability and human-like post-translational modification are achieved, but viral remnants lead to safety concerns and regulatory documentation requirements

Engineering Contradiction:
Improvesafety profileVSAvoidviral particle release
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent applies the extraction principle by removing harmful viral remnants (endogenous retrovirus elements) from the CHO cell genome through targeted gene editing. CRISPR/Cas9 systems are used to specifically excise or disable ERV sequences, thereby extracting the harmful component while preserving the beneficial characteristics of CHO cells for protein production

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent converts the harmful presence of ERV elements into a benefit by using them as targets for CRISPR/Cas9-mediated genome editing. The ERV sequences, which would normally be harmful, become useful markers for guiding the editing machinery to improve cell safety while maintaining production capabilities

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

2Reliability

If comprehensive characterization of CHO cell genomes is performed to detect viral remnants, then safety assessment is improved, but time consumption and cost increase

Engineering Contradiction:
Improvesafety assessmentVSAvoidcharacterization time
Core Design Contradiction:
ReliabilityVSLoss of time

Solution Approach 1:

The patent applies preliminary action by proactively engineering CHO cells to eliminate viral remnants before they can cause safety issues or require extensive detection. The CRISPR/Cas9 editing is performed in advance during cell line development, preventing the need for lengthy characterization processes later in regulatory approval

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent replaces complex mechanical characterization processes with a more efficient molecular biology approach. Instead of using labor-intensive methods to detect and characterize viral remnants, the invention uses CRISPR/Cas9 genome editing to directly modify and eliminate the harmful elements, streamlining the safety assessment process

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The engineered cells significantly reduce the expression and release of viral particles, improving safety and regulatory compliance by minimizing the risk of adventitious agents, and facilitating more efficient and cost-effective candidate drug development and production.

Implementation Method 1

using CRISPR/Cas9 systems to introduce deletions, additions, or substitutions in ERV elements

Methodology Applied
Scientific EffectCRISPR/Cas9 genome editing:

Data Source

PatentUS20240093244A1Eukaryotic cells for protein manufacturing and methods of making them
Publication Date: 2024.03.21 SELEXIS SA
  • US20240093244A1 patent drawing
  • US20240093244A1 patent drawing
  • US20240093244A1 patent drawing

AI summary

Disclosed are mammalian cells and mammalian cell lines that have a reduced load of remnants of past viral/retroviral infections and methods of producing and using the same.