C-Kit Kinase Modulation via Segmented Chemical Structures

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Solution Overview

Problem

There is a need for compounds and methods to modulate receptor protein kinases, particularly c-kit, which are implicated in various pathologic states including neoplastic pathology, carcinogenesis, and tumor growth, as existing treatments are inadequate.

Innovation Solution

The disclosure provides compounds of specific formulas, including (I′), (I), (II), (III), and (IV), and their pharmaceutically acceptable salts, solvates, and isomers, which are used to modulate protein kinases, specifically c-kit protein kinases, for treating diseases mediated by these enzymes.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If existing treatments are used for c-kit mediated diseases, then treatment options are limited, but therapeutic effectiveness is inadequate

Engineering Contradiction:
Improvetherapeutic effectivenessVSAvoidtreatment options
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent employs parameter changes by developing a series of chemical compounds with varying molecular structures (formulas I, II, III, IV and their variants) to optimize c-kit inhibition. The compounds feature different substituents (R1-R6, L1-L3, G groups) and ring systems that are systematically modified to improve therapeutic effectiveness while maintaining selectivity for c-kit kinase modulation.

Inventive Principle:
Principle #35Parameter changes

2Measurement precision

If compounds are designed to selectively target c-kit kinase, then specificity is improved, but compound complexity increases

Engineering Contradiction:
Improvekinase selectivityVSAvoidcompound structure
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent applies segmentation by dividing the kinase inhibitor compound into distinct functional modules: a core heterocyclic ring system (formula I core structure), substituent groups (R1-R6 at specific positions), linker regions (L1-L3), and terminal groups (G). This modular structure allows for systematic optimization of c-kit selectivity while managing molecular complexity through defined structural elements.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent implements local quality by placing specific functional groups and substituents at predetermined positions within the molecular structure. The R1-R6 groups, L1-L3 linkers, and G terminal groups are strategically positioned to maximize interaction with specific residues in the c-kit kinase binding pocket, thereby enhancing selectivity without requiring uniform complexity throughout the entire molecule.

Inventive Principle:
Principle #3Local quality

Data Source

PatentUS10301280B2Compounds and methods for kinase modulation, and indications therefor
Publication Date: 2019.05.28 PLEXXIKON INC
  • US10301280B2 patent drawing
  • US10301280B2 patent drawing
  • US10301280B2 patent drawing

AI summary

Compounds active on c-kit protein kinases or mutant c-kit protein kinases having any mutations are described, as well as methods of making and using such compounds to treat diseases and conditions associated with aberrant activity of the c-kit protein kinases and/or mutant c-kit protein kinases.