Codon Optimized Factor VIII Gene Expression

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Solution Overview

Problem

Hemophilia A treatment is hindered by the high cost and inefficiency of commercial production of recombinant Factor VIII protein due to poor expression in heterologous systems, leading to frequent and inconvenient administration for patients.

Innovation Solution

Development of nucleic acid molecules with optimized sequences for Factor VIII activity, including increased codon adaptation index, reduced MAR/ARS sequences, and absence of destabilizing elements, to enhance expression and yield in host cells such as CHO and HEK293 cells.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of manufacture

If recombinant FVIII protein is produced in heterologous expression systems, then treatment cost can be reduced, but expression level is two to three orders of magnitude lower than similarly sized proteins

Engineering Contradiction:
Improvetreatment costVSAvoidexpression level
Core Design Contradiction:
Ease of manufactureVSProductivity

Solution Approach 1:

The patent applies codon optimization to change the nucleotide sequence parameters of the FVIII gene, replacing rare codons with more frequently used codons in mammalian cells. This parameter change in the genetic code increases translation efficiency and expression levels while maintaining the same amino acid sequence, thereby resolving the contradiction between reduced production cost and low expression level in heterologous systems.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent removes cis-acting elements from the FVIII coding sequence that inhibit expression, including transcriptional silencer elements, matrix attachment-like sequences (MARs), and transcriptional elongation inhibitory elements. By extracting these harmful regulatory elements, the patent enables significantly higher expression levels in heterologous mammalian cell systems, making recombinant production economically viable.

Inventive Principle:
Principle #2Taking out (Extraction)

2Reliability

If FVIII is administered frequently (two to three times weekly for prophylaxis, one to three times daily for on-demand treatment), then bleeding episodes can be controlled, but treatment convenience deteriorates

Engineering Contradiction:
Improvebleeding controlVSAvoidtreatment convenience
Core Design Contradiction:
ReliabilityVSEase of operation

Solution Approach 1:

The patent extends the plasma half-life of FVIII by modifying its molecular parameters through fusion with long-half-life proteins (albumin, IgG Fc region, transferrin) or PEGylation. These parameter changes in the protein structure enable less frequent administration (every 1-2 weeks instead of daily or weekly), maintaining reliable bleeding control while dramatically improving treatment convenience and patient quality of life.

Inventive Principle:
Principle #35Parameter changes

Data Source

PatentUS20240141019A1Optimized factor viii gene
Publication Date: 2024.05.02 BIOVERATIV THERAPEUTICS INC
  • US20240141019A1 patent drawing
  • US20240141019A1 patent drawing
  • US20240141019A1 patent drawing

AI summary

The present invention provides codon optimized Factor VIII sequences, vectors and host cells comprising codon optimized Factor VIII sequences, polypeptides encoded by codon optimized Factor VIII sequences, and methods of producing such polypeptides. The present invention also provides methods of treating bleeding disorders such as hemophilia comprising administering to the subject a codon optimized Factor VIII nucleic acid sequence or the polypeptide encoded thereby.