Codon-Optimized GLA Gene Expression in Cardiac Tissue via rAAV Vector

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Solution Overview

Problem

Current gene therapies for Fabry disease, particularly targeting cardiac tissue, face challenges due to insufficient transduction of human cardiomyocytes and poor uptake of recombinant AGA enzyme, leading to unmet medical needs and high cardiovascular mortality.

Innovation Solution

Development of codon-optimized nucleic acid molecules encoding human galactosidase A (AGA) with enhanced expression levels, combined with a recombinant adeno-associated virus (rAAV) vector system, specifically targeting cardiac tissue using a modified capsid and transcription control sequences to achieve higher AGA protein expression and activity.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If wild-type AAV1 vector is used for cardiac gene therapy, then liver targeting is achieved, but cardiac tissue transduction is insufficient

Engineering Contradiction:
Improvecardiac tissue transduction efficiencyVSAvoidtissue targeting specificity
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent modifies the AAV capsid protein at specific locations to confer cardiac tissue specificity. By introducing point mutations or peptide insertions at particular epitopes on the capsid surface, the vector achieves localized recognition by cardiac tissue receptors while maintaining overall viral structure and function.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent alters the physical-chemical parameters of the AAV capsid through amino acid substitutions. These changes in capsid composition modify the vector's tissue tropism, transforming it from liver-targeting (AAV1) to cardiac-targeting capability while preserving viral packaging and delivery functions.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If recombinant AGA enzyme is administered, then enzyme replacement therapy is provided, but cellular uptake is poor leading to insufficient treatment efficacy

Engineering Contradiction:
Improvetreatment efficacyVSAvoidcellular uptake efficiency
Core Design Contradiction:
ReliabilityVSEase of operation

Solution Approach 1:

The patent uses AAV vectors as intermediaries to deliver the GLA gene directly into cardiac cells. Rather than administering recombinant enzyme that must be taken up by cells, the viral vector serves as a mediator that facilitates efficient gene delivery and sustained endogenous enzyme production within the target tissue.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent employs codon-optimized GLA gene sequences that are pre-adapted for high-level expression in human cells. This preliminary optimization of the transgene ensures that once delivered by the AAV vector, the gene produces maximum enzyme activity, compensating for any potential uptake limitations.

Inventive Principle:
Principle #10Preliminary action

3Productivity

If codon-optimized GLA gene is delivered via AAV vector, then AGA protein expression is enhanced, but vector complexity increases

Engineering Contradiction:
ImproveAGA protein expression levelVSAvoidvector construction complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent divides the complex vector construction into separate modular components: the codon-optimized GLA cDNA insert, the AAV backbone elements (ITRs, promoter, polyA signal), and the capsid gene. This segmentation allows independent optimization of each module and simplifies the overall assembly process through standardized cloning techniques.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent uses codon optimization tables and algorithms that replicate successful coding sequences from highly expressed human genes. By copying proven codon usage patterns from constitutively expressed genes, the GLA transgene achieves high expression levels without requiring complex regulatory element design.

Inventive Principle:
Principle #26Copying

Data Source

PatentUS11802278B2Codon optimized GLA genes and uses thereof
Publication Date: 2023.10.31 4D MOLECULAR THERAPEUTICS INC
  • US11802278B2 patent drawing
  • US11802278B2 patent drawing
  • US11802278B2 patent drawing

AI summary

The present disclosure provides codon optimized nucleotide sequences encoding human alpha-galactosidase A, vectors, and host cells comprising codon optimized alpha-galactosidase A sequences, and methods of treating disorders such as Fabry disease comprising administering to the subject a codon optimized sequence encoding human alpha-galactosidase A.