Codon-Optimized TCR for SSX-2 Targeting

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Solution Overview

Problem

Adoptive cell therapy for cancer faces challenges in generating human T cells with anti-tumor potential and the toxicity of transferred T cells to normal tissues, limiting its widespread application.

Innovation Solution

Development of a codon-optimized nucleic acid sequence encoding a T cell receptor (TCR) with antigenic specificity for synovial sarcoma X Breakpoint (SSX)-2, which also recognizes SSX-3, to create a recombinant expression vector and host cells for use in treating various cancers, minimizing toxicity by targeting cancer cells specifically.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If T cells are transferred to treat cancer, then anti-tumor potential is improved, but toxicity to normal tissues increases

Engineering Contradiction:
Improveanti-tumor potentialVSAvoidtoxicity to normal tissues
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The T cell receptor is engineered with specific antigen recognition properties to differentiate between cancer cells and normal cells. The TCR is designed to recognize SSX-2 and SSX-3 antigens that are specifically expressed on cancer cells, while not recognizing normal tissues. This localized specificity allows the T cells to attack cancer cells while sparing normal tissues, resolving the contradiction between anti-tumor efficacy and toxicity reduction.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent modifies the T cell receptor parameters by engineering chimeric TCRs with altered antigen recognition specificities. The TCRs are designed to recognize multiple antigens (SSX-2 and SSX-3) with different binding affinities, and the patent optimizes parameters such as antigen binding affinity, T cell activation threshold, and cytokine production levels to enhance cancer cell killing while reducing off-target toxicity to normal tissues.

Inventive Principle:
Principle #35Parameter changes

2Reliability

If T cells with anti-tumor potential are generated, then cancer treatment efficacy is improved, but difficulty in generating such T cells increases

Engineering Contradiction:
Improveanti-tumor potentialVSAvoiddifficulty in generating T cells
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent uses gene transfer technology to copy and introduce engineered TCR genes into patient's own T cells. Rather than attempting to generate de novo T cells with desired specificity, the patent copies functional TCR sequences into autologous T cells, which then acquire the desired anti-tumor specificity. This approach simplifies the manufacturing process by using established gene transfer methods rather than requiring complex in vitro T cell differentiation and selection protocols.

Inventive Principle:
Principle #26Copying

3Adaptability or versatility

If TCR is designed to recognize multiple antigens, then versatility in treating different cancers is improved, but complexity of TCR structure increases

Engineering Contradiction:
Improveability to recognize multiple antigensVSAvoidTCR structure complexity
Core Design Contradiction:
Adaptability or versatilityVSDevice complexity

Solution Approach 1:

The patent designs chimeric TCRs that function as multi-functional receptors capable of recognizing multiple different antigens (SSX-2 and SSX-3) through a single receptor structure. The TCR is engineered with variable regions that can bind to different antigen peptides presented by MHC molecules, allowing one TCR to perform multiple recognition functions. This universal design approach enables versatility in treating different cancer types that express different SSX antigens without requiring separate TCRs for each antigen.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent merges the antigen recognition specificities for multiple SSX antigens into a single chimeric TCR molecule. By combining multiple antigen recognition capabilities into one unified receptor structure, the patent achieves multi-antigen recognition while avoiding the complexity of coordinating multiple separate TCRs. The chimeric TCR integrates variable regions from different parental TCRs to create a single molecule with broad antigen specificity, simplifying the overall system architecture.

Inventive Principle:
Principle #5Merging (Combining)

Data Source

PatentEP3533802B1Anti-SSX-2 t cell receptors and related materials and methods of use
Publication Date: 2021.03.17 THE GOVERNMENT OF THE UNITED STATES OF AMERICA AS REPRESENTED BY THE SECRETARY DEPARTMENT OF HEALTH & HUMAN SERVICES
  • EP3533802B1 patent drawingFigure 1A
  • EP3533802B1 patent drawingFigure 1B
  • EP3533802B1 patent drawingFigure 2

AI summary

The invention provides an isolated or purified T cell receptor (TCR) having antigenic specificity for synovial sarcoma X Breakpoint (SSX)-2. The invention further provides related polypeptides and proteins, as well as related nucleic acids, recombinant expression vectors, host cells, and populations of cells. Further provided by the invention are antibodies, or an antigen binding portion thereof, and pharmaceutical compositions relating to the TCRs of the invention. Methods of detecting the presence of cancer in a host and methods of treating or preventing cancer in a host are further provided by the invention.