Crop Nutrient Sensing via Gene Expression Manipulation

Resolve Bottlenecks,
Find Innovative Solutions
Generate Solutions

Solution Overview

Problem

Current technologies fail to effectively sense and utilize nitrogen (N) and water (W) interactions to enhance crop production on marginal soils, which are limited in both N and W, posing a challenge for increasing food production to feed a growing global population.

Innovation Solution

The disclosure identifies mechanisms for N and W sensing in crops, specifically using rice as an example, and provides methods and compositions to determine and manipulate gene expression related to N/W interactions, enabling optimization of plant biomass and yield in low-N and arid conditions by identifying and altering the expression of genes such as LOC_Os10g09240, LOC_Os12g29400, LOC_Os05g31020, LOC_Os03g57240, and LOC_Os01g51360.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional crop production methods are used on marginal soils with low nitrogen and water availability, then crop yield and biomass are limited, but increasing nitrogen and water input is not feasible due to resource constraints and environmental concerns

Engineering Contradiction:
Improvecrop yieldVSAvoidnitrogen and water availability
Core Design Contradiction:
ProductivityVSQuantity of substance

Solution Approach 1:

The patent changes the physiological parameters of plants by manipulating gene expression (particularly ABA-responsive genes and transcription factors) to alter how plants sense and respond to nitrogen and water signals. This allows plants to maintain high productivity under low nutrient conditions by changing their internal sensing thresholds and response mechanisms rather than increasing external inputs

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent replaces the mechanical/physical approach of increasing nitrogen and water application with a biological/molecular approach using gene expression manipulation. By substituting chemical inputs with genetic control mechanisms, the system achieves improved yield without proportionally increasing substance inputs

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Adaptability or versatility

If breeding or engineering crops adapted to soils poor in both nitrogen and water is pursued, then crop production on marginal soils can be improved, but the underlying sensing mechanisms are not well understood

Engineering Contradiction:
Improvecrop adaptation to marginal soilsVSAvoidsensing mechanism knowledge
Core Design Contradiction:
Adaptability or versatilityVSLoss of information

Solution Approach 1:

The patent employs feedback mechanisms by using gene expression analysis to monitor plant responses to nitrogen and water treatments. By measuring expression levels of specific genes (such as ABA-responsive genes) and using this information to guide further breeding or engineering decisions, the system creates a closed-loop approach that reduces information loss about sensing mechanisms

Inventive Principle:
Principle #23Feedback

Solution Approach 2:

The patent introduces gene expression profiles as an intermediary between environmental conditions (nitrogen and water availability) and plant growth responses. These expression profiles serve as measurable mediators that reveal the underlying sensing mechanisms, bridging the gap between external conditions and internal plant responses

Inventive Principle:
Principle #24Intermediary (Mediator)

Data Source

PatentUS11414715B2Nutrient sensing in crop production
Publication Date: 2022.08.16 NEW YORK UNIV
  • US11414715B2 patent drawing
  • US11414715B2 patent drawing
  • US11414715B2 patent drawing

AI summary

Provided are methods and mRNA expression chips for identifying genes that are defined by certain nitrogen and water content relationships in soil. The genes can be up or down regulated under low nitrogen or arid conditions to increase the yield or biomass of crops.