Cyclic Peptide Integrin Antagonists for Selective α4β7 Inhibition

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Solution Overview

Problem

Current integrin antagonists lack selectivity for α4β7 integrin while interfering with α4β1 integrin-ligand interactions, leading to harmful side effects in treating gastrointestinal autoimmune diseases.

Innovation Solution

Development of α4β7 antagonist cyclic dimer peptides and C-N linked cyclic monomer and dimer peptides that exhibit high specificity for α4β7 integrin, utilizing disulfide, lactam, or olefin bonds for increased stability and oral bioavailability.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If monoclonal antibodies or small molecule antagonists are used to inhibit integrin-ligand interactions, then anti-inflammatory efficacy is improved, but selectivity for α4β7 over α4β1 deteriorates, leading to harmful side effects

Engineering Contradiction:
Improveanti-inflammatory efficacyVSAvoidside effects from non-selective inhibition
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The peptide employs local quality by incorporating specific amino acid residues at defined positions (e.g., Xaa5 is N-Me-Arg, Xaa6 is Ser, Xaa7 is Asp) that create distinct binding characteristics for α4β7 versus α4β1. The cyclic structure with specific residue placement allows different regions of the molecule to interact selectively with α4β7 integrin while avoiding interference with α4β1, thereby achieving high selectivity without sacrificing efficacy.

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The patent applies parameter changes by modifying the chemical structure of the integrin antagonist through cyclization and specific amino acid substitutions. The cyclic configuration and N-methylation of arginine residues alter the pharmacological parameters of the molecule, enabling it to distinguish between α4β7 and α4β1 integrins. These structural parameter changes result in high affinity binding to α4β7 while maintaining selectivity against α4β1, thus eliminating harmful side effects.

Inventive Principle:
Principle #35Parameter changes

2Ease of manufacture

If conventional peptide structures are used, then synthesis is simpler, but oral bioavailability and stability deteriorate

Engineering Contradiction:
Improvepeptide synthesis simplicityVSAvoidoral bioavailability and stability
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent merges the peptide chain into a cyclic structure by forming a bond between the C-terminus and N-terminus, creating a closed loop configuration. This cyclization merges the terminal groups into a unified structural element, preventing degradation and improving oral bioavailability. The cyclic dimer structure combines two monomer units linked through disulfide bonds, enhancing stability while maintaining synthesizability through established cyclic peptide methodology.

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The invention uses composite material principles by creating a cyclic dimer structure composed of two peptide monomers linked through disulfide bonds. This composite configuration combines the properties of individual monomers while introducing enhanced stability and oral bioavailability through the cyclic architecture. The disulfide crosslinking creates a robust molecular framework that resists proteolytic degradation, thereby improving reliability without significantly complicating the synthesis process.

Inventive Principle:
Principle #40Composite materials

Data Source

PatentUS10301371B2Cyclic monomer and dimer peptides having integrin antagonist activity
Publication Date: 2019.05.28 PROTAGONIST THERAPEUTICS INC
  • US10301371B2 patent drawing
  • US10301371B2 patent drawing
  • US10301371B2 patent drawing

AI summary

The invention relates to C to N cyclized (C-N cyclic) monomer and dimer peptide molecules, as well as peptide dimers which are connected by linker moieties at the N terminus and the C terminus of each peptide subunit, which inhibit binding of α4β7 to the mucosal addressin cell adhesion molecule (MAdCAM) in vivo, and show high selectivity against α4β1 binding.