Deformable Inlet Boss for Nanopore Sequencing Fluid Distribution

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Solution Overview

Problem

Current consumable devices for sequencing systems face challenges in efficiently and cost-effectively delivering fluids to nanopore-based sequencing chips, leading to uneven fluid distribution and dead zones that affect the performance of the sequencing process.

Innovation Solution

A consumable device with a sequencing chip featuring a flow cell and inlet boss system, including a deformable inlet boss and a funnel-shaped dispense tip receptacle, which allows for a fluid-tight seal and even fluid distribution across the chip, along with a method of delivering fluid using a piercing tool to create a seal and ensure consistent fluid flow.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Manufacturing precision

If a conventional connection interface is used between the dispensing device and consumable device, then the device complexity is reduced, but the fluid distribution becomes uneven and dead zones are created

Engineering Contradiction:
Improvefluid distribution uniformityVSAvoidconnection interface complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The connection interface is divided into multiple components: a flow cell with inlet bosses, a flow cell cover with receptacles, and a dispense tip. This segmentation allows each component to be optimized independently for fluid distribution while maintaining overall system functionality.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The inlet bosses extend vertically from the flow cell base, creating a three-dimensional connection interface. This vertical dimension allows the dispense tip to approach from below and form a seal at a different elevation, improving fluid distribution across the chip surface.

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

2Reliability

If a simple dispense tip receptacle is used, then the ease of manufacture is improved, but the fluid-tight seal cannot be achieved

Engineering Contradiction:
Improveseal integrityVSAvoidreceptacle manufacturing complexity
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The dispense tip receptacle incorporates a curved or arched bottom surface that complements the shape of the dispense tip. This curvature allows the receptacle walls to converge and form a tight seal around the tip, preventing fluid leakage while maintaining a manufacturable structure.

Inventive Principle:
Principle #14Spheroidality (Curvature)

Solution Approach 2:

The receptacle is designed with thin, flexible walls that can deform slightly to conform to the dispense tip geometry. This flexibility enables reliable sealing without requiring complex machining or assembly procedures.

Inventive Principle:
Principle #30Flexible shells and thin films

3Productivity

If the inlet boss lumen diameter is not optimized, then the ease of manufacture is improved, but the fluid flow consistency deteriorates

Engineering Contradiction:
Improvefluid delivery efficiencyVSAvoidlumen fabrication complexity
Core Design Contradiction:
ProductivityVSEase of manufacture

Solution Approach 1:

The inlet boss lumen diameter is specifically optimized to match the dispense tip inner diameter. This parameter matching ensures consistent fluid flow from the reservoir through the tip and onto the chip, while the lumen can still be fabricated using standard molding techniques.

Inventive Principle:
Principle #35Parameter changes

4Manufacturing precision

If a non-funnel shaped receptacle is used, then the ease of operation is improved, but the fluid distribution uniformity deteriorates

Engineering Contradiction:
Improvefluid distribution uniformityVSAvoiddispense tip insertion ease
Core Design Contradiction:
Manufacturing precisionVSEase of operation

Solution Approach 1:

The receptacle features an asymmetric funnel shape with a wider opening at the top that gradually narrows toward the bottom. This asymmetric geometry guides the dispense tip into the correct position during insertion while ensuring even fluid distribution across the chip surface.

Inventive Principle:
Principle #4Asymmetry

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The solution ensures efficient and consistent fluid delivery to all sensors on the sequencing chip, reducing dead zones and improving the sequencing process by maintaining a fluid-tight seal and optimizing fluid flow, thereby enhancing the sequencing efficiency and robustness of the system.

Implementation Method 1

the at least one inlet boss is made of a deformable material capable of conforming to the dispense tip

Methodology Applied
Scientific EffectElastic deformation: Elasticity

Data Source

PatentEP4034875B1Interface for automated fluid injection
Publication Date: 2024.10.30 F HOFFMANN LA ROCHE & CO AG
  • EP4034875B1 patent drawingFigure 1
  • EP4034875B1 patent drawingFigure 2
  • EP4034875B1 patent drawingFigure 3

AI summary

A consumable device used in a nanopore based sequencing system can include a nanopore chip, a flow cell with one or more flow channels, and a flow cell cover. A fluidic interface can be used to deliver fluid to the flow cell. The fluid interface can include a flow cell boss and the flow cell cover can include a receptacle for receiving the flow cell boss. A dispense tip can be used to introduce fluid into the flow cell through the flow cell boss.