Deshydroxy Vancomycin Preparation via Multi-Step Chromatography

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Solution Overview

Problem

There is an urgent need for novel antibiotics to treat human diseases, particularly against methicillin-resistant Staphylococcus aureus and Clostridium difficile infections, as existing vancomycin derivatives may lose activity due to structural modifications and variations in fermentation strains.

Innovation Solution

A method for preparing deshydroxy vancomycin through fermentation of Amycolatopsis orientalis, involving the steps of preparing a concentrated solution, separating and purifying using column chromatography with specific mobile phases, and further purification with macroporous adsorption resin chromatography, to obtain a refined filtrate containing vancomycin hydrochloride and deshydroxy vancomycin.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Adaptability or versatility

If structural modification is performed on known antibiotic substances to develop new drugs, then novel antibiotics can be obtained, but the modified substances may lose the required antibacterial activity

Engineering Contradiction:
Improvenovelty of antibioticVSAvoidantibacterial activity
Core Design Contradiction:
Adaptability or versatilityVSReliability

Solution Approach 1:

The invention changes the chemical structure parameter of vancomycin by removing the hydroxyl group at position 4 to create deshydroxy vancomycin. This specific structural modification maintains the glycopeptide core framework while altering one functional group, thereby achieving novelty while preserving antibacterial activity against MRSA and C. difficile.

Inventive Principle:
Principle #35Parameter changes

2Adaptability or versatility

If multiple derivatives are produced in vancomycin fermentation, then variety of compounds are obtained, but separation and purification becomes complex

Engineering Contradiction:
Improvevariety of derivativesVSAvoidseparation and purification process
Core Design Contradiction:
Adaptability or versatilityVSDevice complexity

Solution Approach 1:

The invention segments the fermentation broth into different components using a multi-step chromatographic process. First, gel chromatography separates proteins and small molecules from the target glycopeptides. Then, ion-exchange chromatography further separates vancomycin from deshydroxy vancomycin based on their charge differences, achieving pure product isolation.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The invention uses two different chromatographic media as intermediaries: gel chromatography medium for initial separation and ion-exchange chromatography medium for final purification. Each intermediary is selected based on its specific separation mechanism, enabling efficient isolation of the target compound from complex fermentation broth.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Reliability

If demethyl vancomycin is used as a congeneric drug, then treatment of Clostridium difficile is achieved, but it cannot replace imported vancomycin completely

Engineering Contradiction:
Improveantibacterial efficacyVSAvoiddrug availability
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The invention uses the domestic strain Amycolatopsis orientalis to naturally produce deshydroxy vancomycin along with vancomycin during fermentation. This self-service approach allows China to produce its own novel vancomycin derivative domestically, achieving both therapeutic efficacy and drug availability independence.

Inventive Principle:
Principle #25Self-service

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The method effectively isolates high-purity deshydroxy vancomycin, maintaining antibacterial activity and avoiding drug resistance, which can be used in treating susceptible bacterial infections and as a pharmaceutical composition.

Implementation Method 1

preparing a concentrated solution containing vancomycin and deshydroxy vancomycin by fermentations of Amycolatopsis orientalis

Methodology Applied
Scientific EffectFermentation: Fermentation

Implementation Method 2

separating and purifing the concentrated solution to obtain a refined filtrate containing vancomycin hydrochloride and the deshydroxy vancomycin by column chromatography

Methodology Applied
Scientific EffectChromatography: Chromatography

Implementation Method 3

further separating and purifing the refined filtrate to obtain the deshydroxy vancomycin by chromatography in a macroporous adsorption resin chromatography column

Methodology Applied
Scientific EffectAdsorption: Adsorption

Data Source

PatentEP2208732B1Deshydroxy vancomycin, the preparation, pharmaceutical composition and the use
Publication Date: 2015.04.29 ZHE JIANG MEDICINE CO LTD XINCHANG PHARMA FAB
  • EP2208732B1 patent drawingFigure 1
  • EP2208732B1 patent drawing
  • EP2208732B1 patent drawing

AI summary

The present invention provides a deshydroxy vancomycin compound,a method of its preparation and a pharmaceutical composition comprising a pharmaceutically effective amount of the deshydroxy vancomycin and the use of the said composition in the preparation of drugs for the treatment of susceptible bacteria infections. The method includes the following steps: (1) preparing a concentrated vancomycin solution containing the deshydroxy vancomycin by fermentations of Amycolatopsis Orientalis with Deposit No. CGMCCNO.1183; (2) separating and purifing the concentrated vancomycin solution to obtain a refined filtrate of vancomycin hydrochloride containing the deshydroxy vancomycin by column chromatography; and (3) further separating and purifing the refined filtrate to obtain the deshydroxy vancomycin by chromatography. Wherein, separation and purification is processed by column chromatography in a gel chromatography column containing a salt-water mobile phase, separation and purification is processed by chromatography in a macroporous adsorption resin chromatography column containing a buffer-methanol mobile phase.