dsRNA Molecules for RNAi Pathogen Control

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Solution Overview

Problem

Current methods for controlling plant pathogens like Zymoseptoria tritici, which cause significant crop loss, are limited by resistance development to fungicides and environmental concerns, necessitating the need for effective, environmentally safe, and cost-affordable solutions.

Innovation Solution

The use of nucleic acid molecules such as dsRNAs, siRNAs, shRNAs, miRNAs, and hpRNAs that are complementary to target gene sequences in pathogens, specifically inhibiting essential gene expression through RNA interference (RNAi) to reduce pathogen growth and development.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If fungicides are used to control plant pathogens, then pathogen growth is inhibited, but resistance development occurs and environmental harm increases

Engineering Contradiction:
Improvepathogen control effectivenessVSAvoidenvironmental harm and resistance development
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent replaces chemical fungicides with a biological mechanism (RNA interference) to control pathogen growth. Double-stranded RNA molecules are introduced that specifically target and silence essential pathogen genes, achieving pathogen control without the environmental harm and resistance issues associated with chemical fungicides

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent uses double-stranded RNA as an intermediary molecule that mediates between the plant and pathogen. The dsRNA is taken up by pathogen cells and processed into small interfering RNAs that guide the silencing of specific pathogen genes, providing a targeted biological control mechanism

Inventive Principle:
Principle #24Intermediary (Mediator)

2Adaptability or versatility

If traditional inorganic fungicides are used, then broad-spectrum pathogen control is achieved, but environmental persistence and non-recyclability occur

Engineering Contradiction:
Improvebroad-spectrum pathogen controlVSAvoidenvironmental persistence
Core Design Contradiction:
Adaptability or versatilityVSStability of the object's composition

Solution Approach 1:

The patent employs double-stranded RNA molecules that are biodegradable and short-lived in the environment compared to persistent inorganic fungicides. The dsRNA is naturally degraded by nucleases in the environment and in pathogen cells, providing pathogen control without long-term environmental persistence

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Solution Approach 2:

The patent changes the chemical nature of the control agent from inorganic compounds to nucleic acid-based molecules. This parameter change enables broad-spectrum control through sequence-specific targeting while the RNA molecules are naturally recyclable through degradation and mineralization

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach effectively inhibits pathogen growth and development, potentially leading to mortality, thereby reducing crop damage and the economic impact of diseases like Septoria leaf blotch, while being environmentally friendly.

Implementation Method 1

The use of nucleic acid molecules such as dsRNAs, siRNAs, shRNAs, miRNAs, and hpRNAs that are complementary to target gene sequences in pathogens, specifically inhibiting essential gene expression through RNA interference (RNAi) to reduce pathogen growth and development.

Methodology Applied
Scientific EffectRNA interference (RNAi):

Data Source

PatentUS10913955B2Aldehyde dehydrogenase (ALDH1) nucleic acid molecules that control pathogens
Publication Date: 2021.02.09 CORTEVA AGRISCIENCE LLC

AI summary

This disclosure concerns nucleic acid molecules and methods of use thereof for control of pathogens through RNA interference-mediated inhibition of target coding and transcribed non-coding sequences in pathogens. The disclosure also concerns methods for applying dsRNA through formulations and/or transgenic plants that express nucleic acid molecules useful for the control of pathogens, and the plant cells and plants obtained thereby.