DUF5 Protease Cleaving Ras Oncoproteins via Anthrax Toxin Delivery

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Solution Overview

Problem

Current therapies lack effective methods to directly target and inhibit Ras proteins, which are frequently mutated in human cancers, making it challenging to treat Ras-dependent diseases.

Innovation Solution

Development of bacterial toxins, specifically the DUF5 protease, which cleaves Ras proteins, including mutant isoforms, to block cell proliferation by delivering the toxin to cancer cells using the anthrax lethal factor and protective antigen delivery system.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional radiation or chemical therapy is used to treat cancer, then some therapeutic effect is achieved, but the therapy cannot specifically target Ras proteins and fails to effectively treat Ras-dependent cancers

Engineering Contradiction:
Improveeffectiveness against Ras-dependent cancersVSAvoidability to target Ras proteins
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent uses the anthrax toxin delivery system (protective antigen and lethal factor) as an intermediary to deliver the DUF5Vv protease specifically to cancer cells. The protective antigen binds to cell surface receptors and facilitates entry of the fused toxin-protease complex into the cytosol, where the protease then cleaves Ras proteins. This intermediary delivery mechanism enables specific targeting of Ras-dependent cancers that conventional therapies cannot address.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Manufacturing precision

If DUF5Vv protease is delivered to cancer cells using the anthrax toxin delivery system, then specific cleavage of Ras proteins occurs, but the delivery system complexity increases

Engineering Contradiction:
Improvespecificity of Ras protein cleavageVSAvoidcomplexity of delivery system
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The patent merges the anthrax toxin delivery system with the DUF5Vv protease by creating a fusion protein between the lethal factor and the protease. This combined approach leverages the cell-targeting capability of the anthrax system while incorporating the Ras-cleaving function of DUF5Vv, achieving both specific delivery and specific molecular cleavage in a single therapeutic agent.

Inventive Principle:
Principle #5Merging (Combining)

3Productivity

If Ras proteins are constitutively activated by mutations in cancer cells, then cell proliferation is driven, but conventional drugs cannot block this activated Ras

Engineering Contradiction:
Improvecell proliferation rateVSAvoiddrug efficacy against mutant Ras
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent takes out or removes the constitutively activated Ras proteins from cancer cells by using the DUF5Vv protease to cleave and degrade Ras at the Y32-D33 bond. This extraction approach directly eliminates the oncogenic driver (mutant Ras) rather than attempting to block its activity, thereby stopping the abnormal cell proliferation signal that conventional drugs fail to address.

Inventive Principle:
Principle #2Taking out (Extraction)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The DUF5 protease effectively inhibits Ras activity, leading to cell cycle arrest and death in cancer cells, offering a novel therapeutic approach for Ras-dependent cancers by specifically targeting and irreversibly cleaving Ras proteins.

Implementation Method 1

DUF5Vv is an endopeptidase that cleaves Ras within Switch I

Methodology Applied
Scientific EffectProteolytic hydrolysis: Hydrolysis

Implementation Method 2

delivering the toxin to cancer cells using the anthrax lethal factor and protective antigen delivery system

Methodology Applied
Scientific EffectReceptor-mediated endocytosis:

Data Source

PatentUS10829752B2Bacterial toxins and uses thereof as Ras specific proteases for treating cell proliferation diseases and disorders
Publication Date: 2020.11.10 NORTHWESTERN UNIV
  • US10829752B2 patent drawing
  • US10829752B2 patent drawing
  • US10829752B2 patent drawing

AI summary

Disclosed are bacterial toxins and uses thereof as specific proteases for Ras sarcoma oncoproteins (Ras proteins). The bacterial toxins may be modified for use as pharmaceutical agents for treating Ras-dependent diseases and disorders including cell proliferation diseases and disorders such as cancer.