E. coli Ectoine Production via Xylose-Induced Heterologous Expression

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Solution Overview

Problem

Current methods for producing ectoine, a protective compound for enzymes and biological macromolecules, face challenges in optimizing enzyme activity under adverse conditions and require specific osmotic pressures, temperatures, and salt concentrations, while existing production methods rely on halophilic microorganisms and have limitations in yield and metabolic efficiency.

Innovation Solution

Genetically engineered E. coli bacteria (E. coli ECT06) are constructed to express the ectABC gene cluster from Halomonas elongata, using a non-plasmid system with enhanced promoters and gene modifications to increase metabolic flux and ectoine synthesis, allowing production under moderate or low salt concentrations using glucose as a raw material.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If halophilic microorganisms are used for ectoine fermentation, then ectoine production is achieved, but the production yield and metabolic efficiency are limited

Engineering Contradiction:
Improveectoine production yieldVSAvoidmetabolic efficiency
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent changes the host organism from halophilic microorganisms to E. coli, altering the biological system parameters to achieve higher productivity. The ectABC gene cluster from Halomonas elongata is heterologously expressed in E. coli, which lacks the native ectoine pathway, thereby increasing metabolic efficiency and ectoine yield while avoiding the limitations of halophilic systems

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The ectoine synthesis pathway is segmented into three specific genes (ectA, ectB, ectC) that are individually cloned and heterologously expressed in E. coli. This segmentation allows for precise control and optimization of each enzymatic step in the pathway, improving overall metabolic efficiency and productivity

Inventive Principle:
Principle #1Segmentation

2Reliability

If ectoine production is performed under optimal conditions for enzyme activity, then enzyme stability is improved, but the production process requires specific osmotic pressures, temperatures, and salt concentrations

Engineering Contradiction:
Improveenzyme stabilityVSAvoidproduction condition flexibility
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent changes the physiological parameters of the host system by using E. coli instead of halophilic organisms. This allows ectoine production under moderate or low salt concentrations rather than requiring high salinity conditions, thereby increasing adaptability while maintaining enzyme stability through the heterologous expression system

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The engineered E. coli strain achieves multi-functionality by combining the ectoine synthesis pathway from halophilic bacteria with the robust growth characteristics of E. coli. This universal system can operate under diverse conditions including varying salt concentrations, temperatures, and osmotic pressures, making the production process more versatile

Inventive Principle:
Principle #6Universality (Multi-functionality)

3Productivity

If the ectABC gene cluster is expressed in E. coli, then productivity is improved, but the metabolic flux and synthesis efficiency need enhancement

Engineering Contradiction:
Improveectoine synthesis rateVSAvoidmetabolic flux
Core Design Contradiction:
ProductivityVSQuantity of substance

Solution Approach 1:

The patent applies preliminary action by optimizing the expression system before actual production. The ectABC gene cluster is cloned into expression vectors with strong promoters, and the host E. coli strain is pre-modified to enhance metabolic flux toward ectoine synthesis, ensuring high productivity from the outset

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent implements feedback control by monitoring and optimizing the expression levels of ectA, ectB, and ectC genes. The heterologous expression system allows for regulation of metabolic flux based on ectoine accumulation, preventing pathway bottlenecks and maintaining high synthesis efficiency

Inventive Principle:
Principle #23Feedback

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The genetically engineered bacteria achieve higher yields of ectoine, reaching 12-16 g/L in shake flasks and 35-50 g/L in fermentors, improving metabolic efficiency and flexibility in production conditions.

Implementation Method 1

the production methods of ectoine include fermentation and enzyme catalysis. Thereinto, the halophilic microorganisms are widely used in the fermentation of ectoine

Methodology Applied
Scientific EffectFermentation: Fermentation

Implementation Method 2

the production methods of ectoine include fermentation and enzyme catalysis

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Data Source

PatentUS11535876B2Xylose-induced genetically engineered bacteria used for producing ectoine and use thereof
Publication Date: 2022.12.27 TIANJIN UNIV OF SCI & TECH
  • US11535876B2 patent drawing
  • US11535876B2 patent drawing

AI summary

The present disclosure relates to the field of genetic engineering, especially relates to a xylose-induced genetically engineered bacteria used for producing ectoine as well as a construction method and use thereof. The genetically engineered bacteria is constructed by heterologously expressing the ectABC gene cluster from Halomonas elongata on the E. coli chromosome, using the promoter of xylose transporter coding gene xylF to control the RNA polymerase from T7 bacteriophage, reconstructing a synthesis pathway of ectoine and constructing a plasmid-free system, and enhancing the expression of target genes by a strong promoter T7; the yield of ectoine reached 12-16 g/L after 20-28 h fermentation in shake flask, and reached 35-50 g/L after 24-40 h fermentation in a 5 L fermentor.