Element-Encoded Polymer Particles for Multiplex Bio-Analytical Detection

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Solution Overview

Problem

Current bio-analytical methods face limitations in multiplexing capabilities due to spectral overlap and variability in fluorophores, leading to reduced sensitivity and interference in fluorescence-based cytometry, while elemental analysis offers distinct signals but lacks practical methods for synthesizing element-encoded particles for mass spectrometry-based applications.

Innovation Solution

Development of element-encoded polymer particles with embedded metal ions or atoms, encapsulated within a polymer matrix for colloidal stability and functionalization, allowing for precise elemental staining and multiplexing capabilities in bio-analytical methods, including the use of chelated lanthanide ions in miniemulsion polymerization to create core-shell particles with controlled surface functionality.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Adaptability or versatility

If fluorescent dyes are used for multiplex analysis, then the emission wavelengths and fluorescence intensities provide multi-parametric analysis capability, but spectral overlap and fluorophore variability reduce measurement precision and sensitivity

Engineering Contradiction:
Improvemulti-parametric analysis capabilityVSAvoidsignal resolution
Core Design Contradiction:
Adaptability or versatilityVSMeasurement precision

Solution Approach 1:

The patent replaces the optical detection system (fluorescence-based) with a mass spectrometry-based detection system. Instead of relying on fluorescent dyes whose signals overlap spectrally, the invention uses elemental tags (metals) that are detected by mass spectrometry, which has high mass resolution and can distinguish between different elemental masses without spectral overlap. This substitution of detection mechanism eliminates the fundamental limitation of fluorescent dye multiplexing.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent changes the detection parameter from optical wavelength (fluorescence emission spectrum) to mass-to-charge ratio (mass spectrometry). By measuring the mass of elemental tags rather than their optical emission properties, the system achieves superior resolution and discrimination capability. Mass spectrometry can distinguish between elements with very small mass differences, providing much higher measurement precision than fluorescence detection.

Inventive Principle:
Principle #35Parameter changes

2Adaptability or versatility

If a large number of fluorescent dyes are combined in a single particle to increase permutation number, then multiplexing capability increases, but spectral overlap and detector limitations reduce sensitivity

Engineering Contradiction:
Improvemultiplexing capabilityVSAvoidsensitivity
Core Design Contradiction:
Adaptability or versatilityVSMeasurement precision

Solution Approach 1:

The patent replaces fluorescent dye-based multiplexing with elemental tag-based multiplexing detected by mass spectrometry. Instead of combining multiple fluorophores that suffer from spectral overlap, the invention uses combinations of elemental tags (e.g., different metals or isotopes) that are resolved by their distinct mass signatures. This allows for high-order multiplexing with superior sensitivity because mass spectrometry can detect and distinguish individual elemental masses without the spectral congestion that plagues fluorescence-based approaches.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

3Measurement precision

If elemental analysis is used for particle detection, then distinct signals are obtained, but practical methods for synthesizing element-encoded particles are lacking

Engineering Contradiction:
Improvesignal distinctnessVSAvoidparticle synthesis
Core Design Contradiction:
Measurement precisionVSEase of manufacture

Solution Approach 1:

The patent segments the particle structure into distinct functional components: an inert core (polystyrene or other polymer) and surface-bound elemental tags. This segmentation allows the core to provide structural stability while the surface allows for controlled attachment of elemental tags. The segmentation strategy simplifies synthesis because it decouples the requirements for particle formation from elemental tag attachment, enabling modular manufacturing approaches.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent employs preliminary surface functionalization of particles before elemental tag attachment. By pre-modifying the particle surface with reactive groups (e.g., carboxyl, amine, or other coupling groups), the synthesis process is simplified because the elemental tags can be attached in a controlled, single-step reaction. This preliminary action ensures uniform and stable tag attachment while maintaining ease of manufacture through standardized surface preparation protocols.

Inventive Principle:
Principle #10Preliminary action

4Reliability

If fluorophores are used for bio-analytical detection, then signal detection is enabled, but fluorophore integrity variability causes measurement inconsistency

Engineering Contradiction:
Improvesignal detectionVSAvoidmeasurement consistency
Core Design Contradiction:
ReliabilityVSMeasurement precision

Solution Approach 1:

The patent replaces fluorophore-based detection with elemental tag-based detection using mass spectrometry. Elements and isotopes have invariant mass properties that do not degrade or vary like fluorophores. The elemental tags are chemically stable and their mass signatures remain constant, providing reliable and consistent measurements. This substitution eliminates the fluorophore integrity problem entirely because elements do not undergo the same degradation mechanisms as organic fluorophores.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables massively multiplex bio-analytical methods with improved signal resolution and sensitivity, allowing for the calibration and tuning of elemental flow cytometers, and provides a robust, non-interfering means to detect multiple antigens in a single biological sample with minimal background interference.

Implementation Method 1

element-encoded polymer particles with embedded metal ions or atoms, encapsulated within a polymer matrix for colloidal stability

Methodology Applied
Scientific EffectEncapsulation: Physical Containment

Implementation Method 2

use of chelated lanthanide ions in miniemulsion polymerization to create core-shell particles with controlled surface functionality

Methodology Applied
Scientific EffectChelation: Chemical Bonding

Data Source

PatentUS10871436B2Particles containing detectable elemental code
Publication Date: 2020.12.22 STANDARD BIOTOOLS CANADA INC
  • US10871436B2 patent drawing
  • US10871436B2 patent drawing
  • US10871436B2 patent drawing

AI summary

The invention relates to a new type of element encoded particles suitable for the attachment of bio molecules to enable massively multiplex bio-analytical methods, and to calibrate and tune the elemental flow cytometer mass spectrometer (FC-MS).