Engineered Microorganisms for Ethanol Production

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Solution Overview

Problem

Current microorganisms used for ethanol production from starch and lignocellulosic feedstocks have suboptimal yields and are inhibited by by-products generated during hydrolysis, requiring more efficient and robust strains that can operate under adverse conditions.

Innovation Solution

Genetically engineered Saccharomyces cerevisiae and Escherichia coli strains with specific gene duplications and disruptions, such as the lpp1 gene and ENA locus in yeast, and disruptions in genes like zwf and ndh in E. coli, allowing for improved ethanol production from mixed sugar substrates and increased tolerance to inhibitors like acetate and ethanol.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If native microorganisms are used for ethanol conversion, then the process is simple and cost-effective, but the conversion yield is suboptimal and the microorganisms are inhibited by hydrolysis by-products

Engineering Contradiction:
Improveethanol conversion yieldVSAvoidmicroorganism tolerance to inhibitors
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent applies parameter changes by modifying the genetic composition of microorganisms through gene duplications (lpp1, ENA locus) and disruptions (zwf, ndh, sfcA, maeB, ldhA, frdA, poxB, pta genes). These genetic parameter changes enable the microorganisms to tolerate hydrolysis by-products like acetate and furfural while maintaining high ethanol conversion yields, directly resolving the contradiction between productivity and reliability.

Inventive Principle:
Principle #35Parameter changes

2Productivity

If genetically engineered microorganisms are used to improve ethanol yield, then conversion efficiency increases, but the complexity of the production process increases

Engineering Contradiction:
Improveethanol conversion yieldVSAvoidgenetic engineering complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent applies segmentation by dividing the genetic engineering approach into specific targetable genes and loci (lpp1, ENA locus, zwf, ndh, sfcA, maeB, ldhA, frdA, poxB, pta). This segmentation allows systematic modification of specific genetic elements to achieve desired traits without requiring complete genome redesign, thus improving ethanol yield while managing engineering complexity through modular genetic targets.

Inventive Principle:
Principle #1Segmentation

3Adaptability or versatility

If different sugar-containing substrates are converted, then feedstock versatility is achieved, but different culture conditions and microorganisms are required for each substrate

Engineering Contradiction:
Improvesubstrate conversion capabilityVSAvoidculture condition optimization
Core Design Contradiction:
Adaptability or versatilityVSDevice complexity

Solution Approach 1:

The patent applies universality by creating genetically engineered microorganisms with multi-functional capabilities to convert various sugar-containing substrates (6-carbon sugars, 5-carbon sugars, and mixed sugars) under unified culture conditions. The engineered strains possess broad substrate utilization capabilities through specific gene modifications, eliminating the need to optimize different microorganisms and culture conditions for each substrate type, thus achieving both versatility and operational simplicity.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

These engineered strains achieve ethanol yields of up to 95% from 6-carbon sugars and 99% from 5-carbon sugars, with enhanced resistance to inhibitors and faster conversion rates compared to wild-type strains, optimizing sugar-to-ethanol conversion processes.

Implementation Method 1

typically, such yeast convert sugars to ethanol at a yield of at least 95%

Methodology Applied
Scientific EffectFermentation: Fermentation

Implementation Method 2

such a bacteria can convert 5-carbon sugars to ethanol at a yield of at least 91%, up to a yield of at least 98%

Methodology Applied
Scientific EffectFermentation: Fermentation

Data Source

PatentUS8623622B2Genetically-engineered ethanol-producing bacteria and methods of using
Publication Date: 2014.01.07 REGENTS OF THE UNIVERSITY OF MINNESOTA
  • US8623622B2 patent drawing
  • US8623622B2 patent drawing
  • US8623622B2 patent drawing

AI summary

The present invention describes a number of different microorganisms that have been genetically-engineered to optimize ethanol production. The present invention also describes methods of using such microorganisms to efficiently make ethanol.