Engineered Polypeptides for Low-Lactose GOS Production

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Solution Overview

Problem

Current enzymes used for producing galacto-oligosaccharides, such as those from Bifidobacterium bifidum, require high lactose concentrations or excess acceptor molecules, limiting their efficiency in dairy products like milk, where lactose levels are low.

Innovation Solution

Development of polypeptides with a high ratio of transgalactosylation to hydrolysis activity, specifically designed for Bacillus subtilis expression, which can efficiently convert lactose into galacto-oligosaccharides even at low lactose levels, enhancing the growth of beneficial microbial strains like Bifidobacterium.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If current enzymes from Bifidobacterium bifidum are used for producing GOS, then transgalactosylation activity is achieved, but high lactose concentrations or excess acceptor molecules are required, limiting efficiency in dairy products

Engineering Contradiction:
ImproveGOS production efficiencyVSAvoidlactose concentration requirement
Core Design Contradiction:
ProductivityVSQuantity of substance

Solution Approach 1:

The patent modifies the enzyme's amino acid sequence through specific mutations (e.g., E365Q, E366Q substitutions) to change its catalytic properties. These parameter changes in the enzyme structure enable it to function effectively at lower lactose concentrations and with lower acceptor molecule requirements, directly resolving the contradiction between productivity and substance quantity requirements

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent creates engineered variants that copy the essential transgalactosylation function of the original Bifidobacterium bifidum enzyme while improving its performance characteristics. By copying and optimizing the catalytic core with specific mutations, the enzyme achieves higher efficiency at lower substrate concentrations, suitable for dairy product applications

Inventive Principle:
Principle #26Copying

2Productivity

If high lactose concentrations are used for GOS production, then transgalactosylation activity increases, but the applicability to dairy products like milk is limited due to low natural lactose levels

Engineering Contradiction:
Improvetransgalactosylation activityVSAvoidapplicability to dairy products
Core Design Contradiction:
ProductivityVSAdaptability or versatility

Solution Approach 1:

The enzyme engineering modifies catalytic parameters through amino acid substitutions (e.g., E365Q, E366Q) to shift the enzyme's optimal operating conditions. This enables the enzyme to maintain high transgalactosylation activity at the low lactose concentrations naturally present in dairy products, thereby improving both productivity and adaptability simultaneously

Inventive Principle:
Principle #35Parameter changes

3Productivity

If excess acceptor molecules are used to produce GOS, then transgalactosylation efficiency improves, but production cost and process complexity increase

Engineering Contradiction:
Improvetransgalactosylation efficiencyVSAvoidproduction process simplicity
Core Design Contradiction:
ProductivityVSEase of manufacture

Solution Approach 1:

The patent engineers enzyme variants with modified amino acid sequences (e.g., E365Q, E366Q mutations) that change the enzyme's substrate binding characteristics. These parameter changes enable the enzyme to achieve high transgalactosylation efficiency with minimal or no excess acceptor molecules, simplifying the manufacturing process while maintaining productivity

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

These polypeptides effectively produce galacto-oligosaccharides in situ in dairy products, reducing free lactose levels and promoting the growth of health-promoting bacteria, offering a cheaper and more efficient method for producing these beneficial compounds.

Implementation Method 1

the enzyme hydrolyses lactose and transiently binds the galactose monosaccharide in a galactose-enzyme complex that transfers galactose to the hydroxyl group of water, resulting in the liberation of D-galactose and D-glucose. However, at high lactose concentrations some β-galactosidases are able to transfer galactose to the hydroxyl groups of D-galactose or D-glucose in a process called transgalactosylation whereby galacto-oligosaccharides are produced

Methodology Applied
Scientific EffectTransgalactosylation: Chemical Bonding

Implementation Method 2

The enzyme β-galactosidase (EC 3.2.1.23) usually hydrolyses lactose to the monosaccharides D-glucose and D-galactose

Methodology Applied
Scientific EffectHydrolysis: Hydrolysis

Data Source

PatentUS12089609B2Polypeptides having transgalactosylating activity
Publication Date: 2024.09.17 INT N&H DENMARK APS
  • US12089609B2 patent drawing
  • US12089609B2 patent drawing
  • US12089609B2 patent drawing

AI summary

The present invention relates to polypeptides, specifically polypeptides having transgalactosylating activity and nucleic acids encoding these, and their uses in e.g. dairy product.