3D Cell Structures via Epigenetic Remodeling for Neural Tissue Formation

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Solution Overview

Problem

Current methods for in vitro recapitulation of early mammalian embryogenesis often lack a significant portion of the central nervous system, particularly brain derivatives, in the generated embryo-like structures.

Innovation Solution

The use of epigenetic remodeling factors, specifically modulating the small ubiquitin-like modifier (SUMO) signaling pathway through hypoSUMOylation, to form organized 3D cell structures that include head-to-tail body axis and mid-hindbrain neuronal cell types, enabling the recapitulation of early developmental stages without the need for embryonic stem cells to form brain derivatives.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If embryonic stem cells are combined with extraembryonic stem cells to form embryo-like structures, then the structures can self-organize to mimic post-implantation embryos, but a large portion of the central nervous system is missing, particularly brain derivatives

Engineering Contradiction:
Improveaccuracy of embryonic structure formationVSAvoidcompleteness of neural tissue formation
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent applies parameter changes by modifying the culture conditions and signaling pathway activation states. Specifically, it uses activated WNT signaling (through CHIR99021 treatment) and altered epigenetic states (through hypoSUMOylation) to transform the developmental trajectory of embryonic stem cells, enabling them to form neural tissues that were previously absent in standard embryo-like structures

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent implements preliminary action by pre-treating embryonic stem cells with WNT agonists and SUMO inhibitors before combining them with extraembryonic cells. This preliminary modification of the embryonic stem cell state ensures they are primed to form neural tissues, thereby ensuring complete neural representation in the final embryo-like structure

Inventive Principle:
Principle #10Preliminary action

2Productivity

If Wingless-type integration site protein (WNT) agonist pulse is applied to embryonic stem cells to recapitulate early organogenesis, then organogenesis can be initiated, but brain derivatives and central nervous system structures remain absent

Engineering Contradiction:
Improverate of organogenesisVSAvoidcompleteness of neural tissue development
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent uses composite materials by combining multiple signaling modulators (WNT agonists and SUMO inhibitors) to create a复合 treatment regimen. This composite approach activates both WNT signaling and epigenetic remodeling simultaneously, producing embryo-like structures with complete neural representation that neither treatment could achieve alone

Inventive Principle:
Principle #40Composite materials

Solution Approach 2:

The patent introduces epigenetic remodeling factors as intermediaries between the WNT signaling pathway and neural differentiation. These factors (SUMO inhibitors) mediate the transition from general organogenesis to specific neural tissue formation, enabling the WNT-treated embryonic stem cells to properly develop brain derivatives

Inventive Principle:
Principle #24Intermediary (Mediator)

Data Source

PatentUS20240318134A1In vitro generation of organized 3D cell structures including head-trunk embryo-like structures, using epigenetic remodeling factors-microfluidic platform suitable for their generation
Publication Date: 2024.09.26 INST PASTEUR
  • US20240318134A1 patent drawing
  • US20240318134A1 patent drawing
  • US20240318134A1 patent drawing

AI summary

The invention relates to in vitro generation of organized 3D cell structures recapitulating various degrees of early organogenesis, including head-trunk embryo-like structures, using epigenetic remodeling factors. The invention relates in particular to methods of obtaining such organized 3D cell structures from mammalian cells, and to devices, in particular microfluidic platform, to perform such methods. The invention also concerns the use of the thus obtained 3D cell structures in applications of molecule screening, developmental testing, production of physiologically active substances and models for therapeutic investigation or use.