Modified FIX GLA Domain for Extended Half-Life

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Solution Overview

Problem

Current FIX formulations, such as FIX-Fc, PEGylated FIX, and FIX-Albumin, have short plasma half-lives and low bioavailability, limiting their administration frequency and route, particularly due to unknown reasons related to the FIX molecule itself, and are not effectively extended by fusion with half-life elongation elements like Fc, PEG, or Albumin.

Innovation Solution

Modifying the GLA domain of FIX by deleting or reducing Gla residues, non-covalently binding GLA-domain-recognizing antibodies, or inhibiting Gla-modification to extend plasma half-life and improve bioavailability, allowing for subcutaneous administration and reduced patient burden.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Duration of action of moving object

If FIX is fused with Fc, PEG, or Albumin to extend half-life, then the plasma half-life is extended, but the extension is insufficient compared to human IgG and the route of administration remains intravenous only

Engineering Contradiction:
Improveplasma half-lifeVSAvoidroute of administration
Core Design Contradiction:
Duration of action of moving objectVSEase of operation

Solution Approach 1:

The patent extracts and removes the GLA domain from the FIX molecule. This removal eliminates the harmful interaction between Gla residues and endothelial cells, thereby extending plasma half-life sufficiently to enable subcutaneous administration, which was previously impossible due to rapid clearance

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the molecular structure parameter by deleting or modifying the GLA domain. This structural change fundamentally alters the pharmacokinetic properties, extending half-life from approximately 18 hours to sufficiently long durations that allow subcutaneous administration and reduce dosing frequency

Inventive Principle:
Principle #35Parameter changes

2Reliability

If FIX is administered intravenously to ensure bioavailability, then therapeutic effect is achieved, but patient burden increases due to frequent injections

Engineering Contradiction:
ImprovebioavailabilityVSAvoidpatient burden
Core Design Contradiction:
ReliabilityVSEase of operation

Solution Approach 1:

By removing the GLA domain, the patent eliminates the cause of rapid clearance, thereby maintaining reliable bioavailability through subcutaneous administration. This reduces patient burden by eliminating the need for intravenous access and frequent hospital visits

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent creates a dynamic dosing regimen where the extended half-life allows flexible administration intervals. Patients can receive treatments less frequently (e.g., once weekly or less), adapting the treatment schedule to reduce burden while maintaining therapeutic efficacy

Inventive Principle:
Principle #15Dynamics

3Reliability

If the GLA domain is retained in FIX, then coagulation function is maintained, but plasma half-life is shortened due to interaction with endothelial cells

Engineering Contradiction:
Improvecoagulation functionVSAvoidplasma half-life
Core Design Contradiction:
ReliabilityVSDuration of action of moving object

Solution Approach 1:

The patent segments the FIX molecule by separating the coagulation function from the GLA domain. By deleting or modifying only the GLA domain while retaining the rest of the FIX structure, the invention maintains coagulation activity through the remaining domains while eliminating the harmful endothelial cell interaction

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent applies local modification by specifically targeting and removing only the GLA domain region. This localized change preserves the coagulation function in other domains while eliminating the specific harmful interaction caused by Gla residues with endothelial cells

Inventive Principle:
Principle #3Local quality

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The modifications significantly extend the plasma half-life and improve bioavailability of FIX, enabling less frequent administration and potentially allowing subcutaneous administration, thereby reducing the burden on patients with hemophilia B.

Implementation Method 1

FIX-Fc has fused Fc from human IgG, and this extends its half-life by promoting its recycling via FcRn following uptake into cells, similarly to human IgG

Methodology Applied
Scientific EffectFcRn-mediated recycling:

Implementation Method 2

FIX-Fc has fused Fc from human IgG, and this extends its half-life by promoting its recycling via FcRn following uptake into cells

Methodology Applied
Scientific EffectEndocytosis:

Implementation Method 3

FIX-Fc has fused Fc from human IgG, and this extends its half-life by promoting its recycling via FcRn following uptake into cells, similarly to human IgG

Methodology Applied
Scientific EffectExocytosis:

Implementation Method 4

Gla residues included in the GLA domain of FIX-Fc are the causative factors

Methodology Applied
Scientific EffectGla residue binding to endothelial cells:

Data Source

PatentUS20240018503A1Coagulation factor ix with improved pharmacokinetics
Publication Date: 2024.01.18 CHUGAI PHARMA CO LTD
  • US20240018503A1 patent drawing
  • US20240018503A1 patent drawing
  • US20240018503A1 patent drawing

AI summary

The present invention provides a method for improving or controlling the plasma half-life and/or bio-availability of blood coagulation factor IX (FIX), the method comprising modifying the GLA domain. Examples of such modifications include: (i) non-covalent bonding of a GLA-domain-recognizing antibody or an antibody fragment thereof to the GLA domain; (ii) reduced number of Gla residues in the GLA domain, in comparison to that of a native FIX; (iii) either or both of deletion of one or more glutamic acid residues in the GLA domain and substitution of one or more glutamic acid residues in the GLA domain with another amino acid; and (iv) deletion of a part or all of the GLA domain. The present invention also provides a FIX with improved pharmacokinetics which carries such modifications, a pharmaceutical composition containing the FIX as an active ingredient, a method for producing the FIX, and such.