Fluorescent Enzyme Tagging for Activity Localization

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Solution Overview

Problem

Current methods for determining enzyme activity, such as mass spectroscopy and magnetic resonance imaging, are cumbersome and difficult to scale for multiple enzymes or time points, limiting their effectiveness in identifying enzyme localization and its role in metabolic pathways.

Innovation Solution

A method involving fluorescent tagging of enzymes to assess localization through microscopy, using enzyme condensation promoting and disrupting agents to monitor and modulate enzyme activity, allowing for the determination of enzyme metabolic states and pathways.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Measurement precision

If indirect methods (mass spectroscopy, liquid chromatography) are used to measure enzyme activity, then measurement precision is improved, but device complexity and ease of operation worsen

Engineering Contradiction:
Improveenzyme activity measurementVSAvoidmeasurement system complexity
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent uses fluorescent tags as intermediary molecules that bind to enzymes and emit detectable signals. This intermediary approach allows indirect measurement of enzyme activity through fluorescence intensity, avoiding the need for complex mass spectroscopy or chromatography systems while maintaining measurement capability

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent replaces complex mechanical/chemical analysis systems (mass spectroscopy, liquid chromatography) with optical detection systems. By using fluorescent tags and microscopy, the measurement transitions from complex physical/chemical analysis to simpler optical signal detection, reducing device complexity

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Measurement precision

If indirect methods are used to determine enzyme activity, then measurement precision is improved, but ease of operation deteriorates

Engineering Contradiction:
Improveenzyme activity measurementVSAvoidmeasurement procedure simplicity
Core Design Contradiction:
Measurement precisionVSEase of operation

Solution Approach 1:

Fluorescent tags serve as intermediaries that simplify the measurement process. Instead of complex sample preparation and analysis procedures required by mass spectroscopy or chromatography, the fluorescent tags provide direct optical signals that can be detected through microscopy, making the procedure easier to perform

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent utilizes fluorescence (optical property) changes as indicators of enzyme activity. The fluorescent tags emit light at specific wavelengths when bound to active enzymes, providing a simple visual/readable signal that simplifies operation compared to complex analytical procedures

Inventive Principle:
Principle #32Color changes

3Measurement precision

If conventional methods are used to measure enzyme activity, then measurement precision is maintained, but productivity deteriorates due to inability to scale

Engineering Contradiction:
Improveenzyme activity measurementVSAvoidthroughput for multiple enzymes
Core Design Contradiction:
Measurement precisionVSProductivity

Solution Approach 1:

The fluorescent tagging approach is universally applicable to multiple different enzymes. The same basic methodology (fluorescent tag attachment followed by microscopy detection) can be used across numerous enzyme types, enabling standardized high-throughput screening of multiple enzymes simultaneously without requiring different measurement protocols for each

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The patent enables independent measurement of individual enzyme activities through specific fluorescent tagging of each enzyme of interest. This segmentation allows researchers to study multiple enzymes in parallel by tagging and detecting them separately, significantly increasing productivity compared to sequential analysis methods

Inventive Principle:
Principle #1Segmentation

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach enables efficient and flexible assessment of enzyme activity across multiple enzymes, providing a cost-effective and simpler method to identify active enzymes and metabolic pathways, which can be scaled for various applications, including disease treatment.

Implementation Method 1

The enzyme is tagged with a fluorescent reporter (protein or molecule)

Methodology Applied
Scientific EffectFluorescence: Fluorescence

Data Source

PatentUS10656158B2Identification of enzyme activity through determination of its localization
Publication Date: 2020.05.19 INTERNATIONAL BUSINESS MACHINE CORPORATION
  • US10656158B2 patent drawing
  • US10656158B2 patent drawing
  • US10656158B2 patent drawing

AI summary

A method of determining enzyme activity and identifying and classifying cellular targets, enzymatic pathways, and enzymatic agents involved in regulating metabolism in order to treat pathophysiological disorders. Monitoring enzyme activity is performed via a label-free bio cellular assay or fluorescence imaging. The identified and classified agents are used, together with a therapeutic agent, in the treatment of various metabolism-related diseases.