FTIR Mucus Analysis for Cystic Fibrosis Alginate Response

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Solution Overview

Problem

Cystic fibrosis patients vary in their response to alginate oligomer therapy, with no current method to predict which patients will benefit from treatment, leading to inconsistent clinical outcomes.

Innovation Solution

A method using Fourier transform infrared spectroscopy (FTIR) to analyze mucus samples from cystic fibrosis patients, identifying specific infrared absorbance or transmittance values at wavenumbers 1395-1405 cm^-1, 1537-1547 cm^-1, and 1578-1588 cm^-1 to determine the likelihood of a positive response to alginate oligomer treatment by comparing test patterns with reference patterns from responders and non-responders.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If alginate oligomer therapy is administered to CF patients, then mucus clearance may be improved, but patient response varies significantly with no method to predict who will benefit

Engineering Contradiction:
Improvetreatment response consistencyVSAvoidlack of predictive data on patient response
Core Design Contradiction:
ReliabilityVSLoss of information

Solution Approach 1:

The patent applies preliminary action by performing FTIR analysis on patient sputum samples before initiating alginate oligomer therapy. This pre-screening approach identifies patients likely to respond to treatment based on their mucus biochemical profile, allowing clinicians to predict treatment outcomes in advance and avoid administering ineffective therapy to non-responders.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The patent implements feedback by using FTIR spectroscopy to analyze the biochemical composition of patient sputum and comparing it against reference profiles from known responders and non-responders. This creates a feedback mechanism where the patient's own mucus characteristics provide information about their likely treatment response, enabling personalized treatment decisions.

Inventive Principle:
Principle #23Feedback

2Measurement precision

If FTIR spectroscopy is used to analyze mucus samples, then patient response prediction is enabled, but treatment decision complexity increases

Engineering Contradiction:
Improvemucus biochemical characterizationVSAvoidspectroscopic analysis system
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent applies the taking out principle by extracting only the most diagnostically relevant infrared spectral regions from the complete FTIR spectrum. Instead of analyzing the entire spectrum, the method focuses on specific wavenumber ranges that contain the most informative biochemical signatures, simplifying the analysis while maintaining predictive accuracy.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent applies parameter changes by transforming the complex spectral data into simplified predictive parameters. The FTIR spectrum is converted into a predictive score or classification (responder vs. non-responder) based on comparison with reference profiles, changing the data from complex continuous spectral values to discrete clinical decision parameters.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

Enables the identification of patients likely to respond to alginate oligomer therapy, allowing for targeted treatment and improved clinical outcomes by differentiating between responders and non-responders based on distinct IR spectral features.

Implementation Method 1

The method of the present invention is based therefore on analysing the IR absorbance values and/or transmittance values, in particular a Fourier transform infrared spectroscopy (FTIR) spectrum, of a mucus sample from the respiratory system of a CF patient

Methodology Applied
Scientific EffectInfrared spectroscopy: Absorption Spectroscopy

Data Source

PatentEP3580549B1A companion diagnostic method for use in the treatment of cystic fibrosis with alginate oligomers
Publication Date: 2021.07.14 ALGIFARMA IPR AS
  • EP3580549B1 patent drawingFigure 1
  • EP3580549B1 patent drawingFigure 2
  • EP3580549B1 patent drawing

AI summary

The present invention provides a diagnostic method which may be used to determine the likelihood that a patient with cystic fibrosis will respond to treatment with an alginate oligomer. The method is based on analysingthe IR absorbance values and/or transmittance values, in particular a Fourier transform infrared spectroscopy (FTIR) spectrum, of a mucus sample from the respiratory system of a CF patient at certain specific wavenumbers.