Fusion Polypeptide Scaffold for Lymph Node Targeting

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Solution Overview

Problem

Current cancer immunotherapy faces challenges in identifying and delivering highly specific tumor neoantigens efficiently to maximize T cell activation, leading to limited use of tumor neoantigens in cancer vaccines.

Innovation Solution

A composition comprising a fusion polypeptide encoded by a nucleic acid molecule, which includes antigen polypeptides and scaffold polypeptides, where the scaffold polypeptides are connected through linker sequences to enhance solubility, stability, and lymph node targeting, facilitating antigen presentation and T cell activation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If tumor neoantigens are used in cancer vaccines, then tumor-specific immunogenicity is improved, but technical difficulties in identification, selection, and production limit their practical application

Engineering Contradiction:
Improvetumor-specific immunogenicityVSAvoidproduction of neoantigens
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent combines multiple neoantigen sequences into a single fusion polypeptide construct, merging the identification, selection, and production steps into one integrated molecular entity that can be manufactured as a unified product

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The fusion polypeptide scaffold serves multiple functions simultaneously: it displays multiple neoantigens for broad immunogenicity, provides structural stability for ease of production, and enables efficient delivery to lymph nodes, thereby addressing multiple technical challenges with a single universal construct

Inventive Principle:
Principle #6Universality (Multi-functionality)

2Reliability

If multiple antigen polypeptides are delivered to maximize T cell activation, then anti-tumor immunogenicity is improved, but delivery efficiency and lymph node accumulation are reduced

Engineering Contradiction:
ImproveT cell activationVSAvoiddelivery efficiency
Core Design Contradiction:
ReliabilityVSSpeed

Solution Approach 1:

Multiple antigen polypeptides are merged into a single fusion polypeptide molecule, allowing simultaneous delivery of multiple antigens through one molecular unit, thereby improving delivery efficiency while maintaining comprehensive T cell activation

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The patent transitions from delivering multiple separate antigen molecules to delivering a single multidimensional fusion polypeptide that contains multiple antigen sequences, changing the dimensional organization of antigen delivery to improve pharmacokinetic properties and lymph node accumulation

Inventive Principle:
Principle #17Another dimension (Dimensionality change)

3Stability of the object's composition

If fusion polypeptides with scaffold polypeptides are used, then solubility and stability are improved, but molecular complexity increases

Engineering Contradiction:
Improvesolubility and stabilityVSAvoidmolecular complexity
Core Design Contradiction:
Stability of the object's compositionVSDevice complexity

Solution Approach 1:

The scaffold polypeptide provides localized structural quality improvements at specific regions of the fusion polypeptide, enhancing solubility and stability where needed without requiring complex modifications throughout the entire molecular structure

Inventive Principle:
Principle #3Local quality

Solution Approach 2:

The fusion polypeptide is constructed as a composite molecular material combining antigen polypeptide sequences with scaffold polypeptide sequences, creating a stable soluble construct through the synergistic properties of its composite components

Inventive Principle:
Principle #40Composite materials

Data Source

PatentUS20240317830A1Multi-domain protein vaccine
Publication Date: 2024.09.26 DIONIS THERAPEUTICS INC
  • US20240317830A1 patent drawing
  • US20240317830A1 patent drawing
  • US20240317830A1 patent drawing

AI summary

Disclosed herein is a protein fusion technology that allows the combination of one or more cancer vaccine epitopes with scaffold domains. Also disclosed herein are polypeptide and polynucleic acid compositions encompassed by the protein fusion technology and the methods of using the same.